Gene Dtpsy_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3243 
Symbol 
ID7383792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3457313 
End bp3458686 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content71% 
IMG OID643656556 
Productsun protein 
Protein accessionYP_002554672 
Protein GI222112408 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.183936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAGC CTACTTCCCT CCCGACGCAG GGGGCTCCCG CGGTTGCGTT GAGCCAGTTG 
CTGGACGCCA CCGCCTTGGC GCTGCAGGCG GTGCGCGCAG GGCAGTCGGG CACCGTGGCC
CTGGAGACCA CGGCTGCCGC GCTGCGCCCC GGCGTGCAGG CGCTGCTGTT CCAGGTGCTG
CGCCACCTGG GGCGCGCGCA GGCCTTGCGC CGCCAGCTGG CACCCCGCAA CCCGCCGCCG
CGGGTGGATG CGCTGCTGTG CACCGCCCTG GCATTGGCCT GGGACCCGCA GACCGCTCCC
TACGCGCCGT TCACCCTGGT CAACCAGGCG GTCGAGGCCG CCAAGCGCCA CCCCGCGACG
CGGGCGCAGG CGTCTTTCGT CAACGCCTGC CTGCGGCGCT TCCTGCGTGA GCGCGACACG
CTGGTGGCCG CCACGCAGGG CGACGAGGTC GCCGTGTGGA ACCACCCCAC ATGGTGGATC
CAGCGCCTGC GCCGCGACCA CCCCGATCAG TGGCAGCAGA TCCTGCAGGC GAACAATGCG
CCCGCGCCCA TGGTGCTGCG GATTTCTAAG TCAAAAAGCA CTCCAGCGCT TTACCAGCAA
GCGTTAGAAG CTATCAATAT TGAAGCGATG GCGGTAGGCC CCGAAGGGCT GGCGCTGGCA
CGCCCCGTGC CGGTGCAGCA ACTGCCTGGC TTTGCAGAGG GTGTGGTCTC GGTGCAGGAT
GCCGCCGCGC AGATGGCGGC GCCGCTGCTG CTCAACGGGC TGGACGCCGC GCAGCCGCTG
CGCTTATTGG ATGCCTGCGC CGCCCCCGGC GGCAAGACCG CCCATTTGCT GGAATGGGCC
GCCGCACTGC GGGCCCCTTG GCGGGTCACC GCGTTGGAGG TGGATGCGGC ACGCGCCGAG
CGCATCCATG ACAACCTGCA TCGCCTGGGG CTGAGTGCCC AGGTGCTGGT GGCCGATGCC
GCCGTGCCCG CCGACTGGTG GCAGCAGGCC AGCGGTGGTG AGCCGTTCGA CGCGATCTTG
CTCGACGCGC CCTGTACCGC CTCGGGCATC GTGCGCCGCC ACCCCGACGT GCGCTGGCTG
CGGCGCGAGA GCGACGTGGC CCAGCTGGCC GCGCAGCAGT CGCGTCTGCT GGCGGCGCTG
TGGCCGCTGC TGCGCCCCGG CGGGCGGCTG CTGTATTGCA CCTGTTCGGT GTTCCGGGCC
GAGGGCGACG TGCAGATCGC AGCGTTTCTT GCGCACAACA CTGACGCACG CCTGCTGCCG
TCGCCGGGCC ATTTATTCCC CGGCAGCCCA GACAAGCGCG ACGGGCTCCG TGACAATGGG
CCGGGTGAAC ACGACGGTTT CTTTTACGCC CTGTTGCACA AGGCCCCCGC CTGA
 
Protein sequence
MNKPTSLPTQ GAPAVALSQL LDATALALQA VRAGQSGTVA LETTAAALRP GVQALLFQVL 
RHLGRAQALR RQLAPRNPPP RVDALLCTAL ALAWDPQTAP YAPFTLVNQA VEAAKRHPAT
RAQASFVNAC LRRFLRERDT LVAATQGDEV AVWNHPTWWI QRLRRDHPDQ WQQILQANNA
PAPMVLRISK SKSTPALYQQ ALEAINIEAM AVGPEGLALA RPVPVQQLPG FAEGVVSVQD
AAAQMAAPLL LNGLDAAQPL RLLDACAAPG GKTAHLLEWA AALRAPWRVT ALEVDAARAE
RIHDNLHRLG LSAQVLVADA AVPADWWQQA SGGEPFDAIL LDAPCTASGI VRRHPDVRWL
RRESDVAQLA AQQSRLLAAL WPLLRPGGRL LYCTCSVFRA EGDVQIAAFL AHNTDARLLP
SPGHLFPGSP DKRDGLRDNG PGEHDGFFYA LLHKAPA