Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3243 |
Symbol | |
ID | 7383792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3457313 |
End bp | 3458686 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643656556 |
Product | sun protein |
Protein accession | YP_002554672 |
Protein GI | 222112408 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.183936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAAGC CTACTTCCCT CCCGACGCAG GGGGCTCCCG CGGTTGCGTT GAGCCAGTTG CTGGACGCCA CCGCCTTGGC GCTGCAGGCG GTGCGCGCAG GGCAGTCGGG CACCGTGGCC CTGGAGACCA CGGCTGCCGC GCTGCGCCCC GGCGTGCAGG CGCTGCTGTT CCAGGTGCTG CGCCACCTGG GGCGCGCGCA GGCCTTGCGC CGCCAGCTGG CACCCCGCAA CCCGCCGCCG CGGGTGGATG CGCTGCTGTG CACCGCCCTG GCATTGGCCT GGGACCCGCA GACCGCTCCC TACGCGCCGT TCACCCTGGT CAACCAGGCG GTCGAGGCCG CCAAGCGCCA CCCCGCGACG CGGGCGCAGG CGTCTTTCGT CAACGCCTGC CTGCGGCGCT TCCTGCGTGA GCGCGACACG CTGGTGGCCG CCACGCAGGG CGACGAGGTC GCCGTGTGGA ACCACCCCAC ATGGTGGATC CAGCGCCTGC GCCGCGACCA CCCCGATCAG TGGCAGCAGA TCCTGCAGGC GAACAATGCG CCCGCGCCCA TGGTGCTGCG GATTTCTAAG TCAAAAAGCA CTCCAGCGCT TTACCAGCAA GCGTTAGAAG CTATCAATAT TGAAGCGATG GCGGTAGGCC CCGAAGGGCT GGCGCTGGCA CGCCCCGTGC CGGTGCAGCA ACTGCCTGGC TTTGCAGAGG GTGTGGTCTC GGTGCAGGAT GCCGCCGCGC AGATGGCGGC GCCGCTGCTG CTCAACGGGC TGGACGCCGC GCAGCCGCTG CGCTTATTGG ATGCCTGCGC CGCCCCCGGC GGCAAGACCG CCCATTTGCT GGAATGGGCC GCCGCACTGC GGGCCCCTTG GCGGGTCACC GCGTTGGAGG TGGATGCGGC ACGCGCCGAG CGCATCCATG ACAACCTGCA TCGCCTGGGG CTGAGTGCCC AGGTGCTGGT GGCCGATGCC GCCGTGCCCG CCGACTGGTG GCAGCAGGCC AGCGGTGGTG AGCCGTTCGA CGCGATCTTG CTCGACGCGC CCTGTACCGC CTCGGGCATC GTGCGCCGCC ACCCCGACGT GCGCTGGCTG CGGCGCGAGA GCGACGTGGC CCAGCTGGCC GCGCAGCAGT CGCGTCTGCT GGCGGCGCTG TGGCCGCTGC TGCGCCCCGG CGGGCGGCTG CTGTATTGCA CCTGTTCGGT GTTCCGGGCC GAGGGCGACG TGCAGATCGC AGCGTTTCTT GCGCACAACA CTGACGCACG CCTGCTGCCG TCGCCGGGCC ATTTATTCCC CGGCAGCCCA GACAAGCGCG ACGGGCTCCG TGACAATGGG CCGGGTGAAC ACGACGGTTT CTTTTACGCC CTGTTGCACA AGGCCCCCGC CTGA
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Protein sequence | MNKPTSLPTQ GAPAVALSQL LDATALALQA VRAGQSGTVA LETTAAALRP GVQALLFQVL RHLGRAQALR RQLAPRNPPP RVDALLCTAL ALAWDPQTAP YAPFTLVNQA VEAAKRHPAT RAQASFVNAC LRRFLRERDT LVAATQGDEV AVWNHPTWWI QRLRRDHPDQ WQQILQANNA PAPMVLRISK SKSTPALYQQ ALEAINIEAM AVGPEGLALA RPVPVQQLPG FAEGVVSVQD AAAQMAAPLL LNGLDAAQPL RLLDACAAPG GKTAHLLEWA AALRAPWRVT ALEVDAARAE RIHDNLHRLG LSAQVLVADA AVPADWWQQA SGGEPFDAIL LDAPCTASGI VRRHPDVRWL RRESDVAQLA AQQSRLLAAL WPLLRPGGRL LYCTCSVFRA EGDVQIAAFL AHNTDARLLP SPGHLFPGSP DKRDGLRDNG PGEHDGFFYA LLHKAPA
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