Gene Dtpsy_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3105 
Symbol 
ID7383328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3314688 
End bp3315470 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID643656421 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_002554538 
Protein GI222112274 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0444058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATT CGCTGTGGAT CGCCAAGACC GGCATGACCG CCCAGCAGAC CCAGCTGGAC 
GTGATCTCGC ACAACCTCGC CAACGTGTCC ACCACGGGCT TCAAGCGCAA CAACGCGGTG
TTCGAGGACC TGATCTACCA AAACCTGCGC CAGGTCGGCA GCCAAACCAC CGAGGAGAAC
CAGTTGCCCA CGGGCCTGCA CCTGGGCCTG GGCGTGAACG TGGTCGCCAC CAGCCGCAAC
TTCACGCAGG GCAGCCTGCA GCAGTCGGGC AACAGCCTGG ACGTGGCCAT CGACGGCAAC
GGCTTCTTTG AGGTCCAGTT GCCCGACGGC ACCACCGGCT ACACGCGCGA CGGCGCGTTC
AAGCTCGACT CGCAGGGCCG CGTGGTCACC TCCAGCGGCC TGCCCGTGGC GCCCGGCATC
ACCGTGCCGG CGGACGCCAA GAGCATCAGC ATCAGCGAGC GCGGCATGGT AAGCGTGACC
GTGGCGGGCA ACCCCAACCC CCAGCAGATC GGCCAGCTGG GCATGTCCAG CTTCATCAAC
TCCGCGGGCC TGGAGCCCGT GGGACAGAAC CTGTACCGCG AGTCCGCCGC CTCCGGCGCG
CCGCAGCAGG CCGAGCCGGG CACCAACGGC CTGGGCATCA TCAAGCAGGG CTTCCTGGAG
AACTCCAACG TCAACGTGGT GGAGGAACTG GTCACCATGA TCCAGACCCA GCGCGCCTAC
GAAATGAATT CCAAGGCTAT CCAGACGTCC GACCAGATGC TGGCCAAGCT GTCGCAGCTG
TGA
 
Protein sequence
MMNSLWIAKT GMTAQQTQLD VISHNLANVS TTGFKRNNAV FEDLIYQNLR QVGSQTTEEN 
QLPTGLHLGL GVNVVATSRN FTQGSLQQSG NSLDVAIDGN GFFEVQLPDG TTGYTRDGAF
KLDSQGRVVT SSGLPVAPGI TVPADAKSIS ISERGMVSVT VAGNPNPQQI GQLGMSSFIN
SAGLEPVGQN LYRESAASGA PQQAEPGTNG LGIIKQGFLE NSNVNVVEEL VTMIQTQRAY
EMNSKAIQTS DQMLAKLSQL