Gene Dtpsy_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3080 
Symbol 
ID7383303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3289898 
End bp3290893 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content65% 
IMG OID643656396 
Productflagellar motor switch protein FliG 
Protein accessionYP_002554513 
Protein GI222112249 
COG category[N] Cell motility 
COG ID[COG1536] Flagellar motor switch protein 
TIGRFAM ID[TIGR00207] flagellar motor switch protein FliG 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.178582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAGC AAGGCCTGAA CGACGCCGCC ATCATGCTGA TGTCCCTGGG CGAGGAAGAG 
GCCGCCGAGG TCTTCAAGCA TCTGTCGCCC AAGGAAGTGC AGAAGCTGGG CGAGACCATC
GCGCGCATGC GCACCGTCTC CCGCGAGAAG GTGGACGAGG TGCTCAACCG CTTCACCAGC
GACGCGGCTG CGCAAAGCCT GCTGGTGTCC GACACCAGCA ACTACGTGCG TGCCGTGCTC
AAGCGCGCCC TGGGCGACGA CAAGGCCGCG TTGCTGATCG ACCGCATCCT GCAGGGCGGC
GACGTGTCGG GCATCGAAAG CCTGAAGTGG ATGGACCCGC TGTCGGTGGC CGAGCTGCTG
CGCAACGAGC ATCCGCAGAT CGTCGCGGCC ATCCTGGTGC ACCTGGACGC GGAGCAGTCC
TCGGACATCC TGATGCACCT GACCGAGCGC CAGCGCAGCG AAGTGATGCT GCGCATCGCC
ACGCTGGAGG GCATACAGCC CACGGCCTTG AAGGACCTGA ACGAGGTGCT GTTCAAGGTG
CTGGCCGGCG GCGACAAGGT GCGCAAGAGT TCGCTGGGCG GCATCAAGGC GGCGGCCGAG
ATCATCAACC TGCTGGGTTC GGGCATGGAT GCGGCGGTGC TGGAGTCCAT CCGCGGCTAC
GACATAGAAC TGGCCCAGAA GATCATGGAC AAGATGTTCG TGTTCGATGA CATCGTCAAG
CTCGACGACC GCGCCATCCA GACCGTGCTG CGCGAAGTGG CCTCCGAGAC CCTGGTGGTT
GCGCTCAAGG GAGCGCAACC CGAGGTGCGC GAGAAGATAT TGTCCAACAT GTCCTCGCGC
GCCGCAGAGG CGCTGCGCGA AGACCTGGAG TCGCGCGGCC CGATGCGCCT GTCCGAGGTG
GAGGCGCAGC AGAAGGAAAT TCTCAAGACG GTGCGGCGCC TGGCCGACGA GGGCCAGATC
GCGCTGGCCA GCGGCGGCGA CGACGCCTTT GTGTAG
 
Protein sequence
MDEQGLNDAA IMLMSLGEEE AAEVFKHLSP KEVQKLGETI ARMRTVSREK VDEVLNRFTS 
DAAAQSLLVS DTSNYVRAVL KRALGDDKAA LLIDRILQGG DVSGIESLKW MDPLSVAELL
RNEHPQIVAA ILVHLDAEQS SDILMHLTER QRSEVMLRIA TLEGIQPTAL KDLNEVLFKV
LAGGDKVRKS SLGGIKAAAE IINLLGSGMD AAVLESIRGY DIELAQKIMD KMFVFDDIVK
LDDRAIQTVL REVASETLVV ALKGAQPEVR EKILSNMSSR AAEALREDLE SRGPMRLSEV
EAQQKEILKT VRRLADEGQI ALASGGDDAF V