Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3069 |
Symbol | |
ID | 7383292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3281543 |
End bp | 3282286 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643656385 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_002554502 |
Protein GI | 222112238 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.159103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTGGC TGTCGCCGGT GCTGTGGCCG TTCCTGCGCG TGCTGGCGCT GTTCACGTCG GCGCCGGTGT TCTCGATGCG CGTGATCCCG GTGCGCACGC GCATCGGGCT GGCCTTTTTG GTGGCGGTGT GCGCGCAGGC AGTGCTGCCC GAGCAGCCGG TCATCAGCCT AAACAGCCGC GAGGCTGCGG GCGCGGTGGT GCAGCAGGTG GGGATTGGCC TGGCGATGGG CTTCGCTGTG CGTCTGGTGT TCGCGGCCGT GGAGCTGGCC GGCGAAATCA TCGGCCTGCA GATGGGCCTG AACTTCGCTT CATTCTTCGA CCCCGCGAGC AATGCGCAGG TGAGCGCGGT GGCGCGCTTC TTCGGCAACA TCTCCATGCT GCTGTTCGTG GTGATCAACG GCCACCTGAT GGTGTTGATG GCCGTGGTCA AGAGTTTCGA CAGCTTCCCC GTGGGCGGCA ACTTTCTGCA GGCCATCGGG CAGATGCGGC TGCACGAGCT GGGTGCTTCG CTGTTCTCCA GCGCTTTGTG GATCGCGTTG CCCATGATTG CGCTGCTGCT GTTCGTGAAC CTGACCCTGG GCATCATCTC GCGCGTGGCG CCGCAGATGA ACATCTATGC CGTGGGCTTC CCGGTCACGC TCACCGTGGG CATGCTGGGC ATCACGGCCA CCCTGCCGAT GCTGGAGCAG CCCATGCTGG CGCTGCTGCA GCAGTCCATC GACCTGTTCG CCGCGCCGCG TTAG
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Protein sequence | MAWLSPVLWP FLRVLALFTS APVFSMRVIP VRTRIGLAFL VAVCAQAVLP EQPVISLNSR EAAGAVVQQV GIGLAMGFAV RLVFAAVELA GEIIGLQMGL NFASFFDPAS NAQVSAVARF FGNISMLLFV VINGHLMVLM AVVKSFDSFP VGGNFLQAIG QMRLHELGAS LFSSALWIAL PMIALLLFVN LTLGIISRVA PQMNIYAVGF PVTLTVGMLG ITATLPMLEQ PMLALLQQSI DLFAAPR
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