Gene Dtpsy_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3033 
Symbol 
ID7385479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3236320 
End bp3238014 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content64% 
IMG OID643656343 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002554466 
Protein GI222112202 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.449359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACCA GCACTGCATA CGCCGGCCGC CCCGGCGCTG CCGCCCGACC GATGTCGGCG 
GAAGAAAAGA AGGTGATCTT CGCCTCGTCC CTCGGCACCG TGTTCGAGTG GTACGACTTC
TACCTCTACG GCTCGCTCGC GGCCATCATT GCCAAGCAGT TCTTCAGCGG GCTGGATGCT
GGCGCGGCGT TCATCTTCGC GCTGCTGGCC TTCGCGGCCG GCTTCCTGGT GCGCCCGTTC
GGCGCGCTGG TGTTCGGCCG CCTGGGCGAC ATGATCGGGC GCAAGTACAC CTTCCTGGTG
ACCATCCTGA TCATGGGTAT CTCGACCTTC ATCGTCGGCG TGCTGCCCAG CTACGCCAGC
ATCGGCATCG CGGCACCGGT CATCCTGATC GCGCTGCGCA TGCTGCAAGG CCTGGCGCTG
GGCGGTGAAT ACGGCGGTGC GGCCACCTAC GTGGCCGAGC ACGCGCCCCA TGGCCGCCGC
GGTGCCTACA CCTCGTGGAT CCAGACCACG GCTACGCTGG GCCTGTTCCT GTCGCTGCTG
GTGATTCTGG GCACCCGCAC CATACTGGGC GAGCCCGTGT TCAACGACTG GGGCTGGCGC
ATTCCGTTCC TGGTGTCCAT TCTGCTGCTG GGCATCTCGG TGTGGATTCG CCTGTCGCTG
TCCGAGTCGC CGGCCTTCCA GAAAATGAAG GCCGAGGGCA AGACGTCGAA GGCGCCGCTG
TCCGAGTCGT TCGGCGAATG GAAGAACCTG AAGATCGTGA TCCTGGCGCT GGTGGGCCTG
ACCGCCGGCC AGGCCGTGGT GTGGTACACG GGCCAGTTCT ATGCGCTGTT CTTCCTGATG
CAGCAGCTCA AGGTGGATGC CGTCACGGCC AACCTGATGA TCGCCGCCGC GCTGCTGATC
GGCACCCCGT TCTTCGTGGT GTTCGGCTCG CTGTCCGACA AGATCGGCCG CAAGCCCATC
ATCATGCTGG GTTGCGTGCT GGCCGTGCTG ACCTACTTCC CGGCCTTCAA GATGCTGACG
GAAGCCGCCA ACCCCGACCT GGCCAAGGCC CAGGCGACAG CGGGTGTCGT GGTGACCGCC
GATCCCGCCA CCTGCTCGTT CCAGGGCAAC CCCGTGGCAC GCGAGATCGA CTTCAAGAGC
TCCTGCGACA TCGCCAAGCG CTACCTGGTG CAGAACTCGG TGAGTTATGA CAACGCCGCA
GGCGCACCTG GCTCCCAGGC CGTGGTGAAG ATCGGCGACA AGGTCGTTAC GGCGCCCAGC
GGCACCGTGG TCAACCACAA GTTCGACGAG GCAAGCGTGA AGGCCATCGC CGCCTTCAAG
AAGGAGATGG CGGAAGACCT GAAGCTCGCC GGCTACCCCT CCAAGGCCGA TCCCGCCAAG
ATGAACAAGG TGATGATGAT CGTCATCCTG ACGTATCTGG TGATCCTGGT GACCATGGTC
TACGGCCCCA TCGCGGCCAT GCTGGTGGAA CTGTTCCCCA CGCGCATCCG CTATACCTCC
ATGAGCCTGC CGTACCACAT CGGCAATGGC TGGTTCGGCG GCCTGCTGCC CACGACATCG
TTCGCCATCG TGGCGTCCAC CGGCAATATG TATAACGGCT TGTGGTACCC CATCATCATC
GCCGGCATGA CGGCAGTGAT CGGCACGCTG TTCATCCGCG AAACCAAGGA CGTGGACATC
TACGCCAACG ACTGA
 
Protein sequence
MATSTAYAGR PGAAARPMSA EEKKVIFASS LGTVFEWYDF YLYGSLAAII AKQFFSGLDA 
GAAFIFALLA FAAGFLVRPF GALVFGRLGD MIGRKYTFLV TILIMGISTF IVGVLPSYAS
IGIAAPVILI ALRMLQGLAL GGEYGGAATY VAEHAPHGRR GAYTSWIQTT ATLGLFLSLL
VILGTRTILG EPVFNDWGWR IPFLVSILLL GISVWIRLSL SESPAFQKMK AEGKTSKAPL
SESFGEWKNL KIVILALVGL TAGQAVVWYT GQFYALFFLM QQLKVDAVTA NLMIAAALLI
GTPFFVVFGS LSDKIGRKPI IMLGCVLAVL TYFPAFKMLT EAANPDLAKA QATAGVVVTA
DPATCSFQGN PVAREIDFKS SCDIAKRYLV QNSVSYDNAA GAPGSQAVVK IGDKVVTAPS
GTVVNHKFDE ASVKAIAAFK KEMAEDLKLA GYPSKADPAK MNKVMMIVIL TYLVILVTMV
YGPIAAMLVE LFPTRIRYTS MSLPYHIGNG WFGGLLPTTS FAIVASTGNM YNGLWYPIII
AGMTAVIGTL FIRETKDVDI YAND