| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3032 |
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| Symbol | |
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| ID | 7385478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3235071 |
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| End bp | 3236081 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643656342 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002554465 |
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| Protein GI | 222112201 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0983473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAC CAAGTCGTTT GCTGCTCGCT ACCCTGGCTC TGCTGGGTAC TTCCGCTGTT
TTCGCGCAAA GCAGCGTGAC CCTGTACGGC CGCGTGAACA CGTCGGTGGA ACGCCAGAAG
GTCGGCGGTA CCAGCAACAC CGTCATGGAG AACAACTCCT CGCGCTTCGG CTTCAAGGGC
ACTGAGGACC TGGGCGGCGG CCTGAAGGCC GGCTTCCAGC TGGAAAGCGG CTTCAACTCC
GATACCGGCA CGGGCTCGGG CTGGACCCAC CCCACCACCG GCATGACCTT CGCCCGCCAG
AGCGAAGTGA ACCTGTCCGG CGGCTTCGGC ATGATCCGCC TGGGCAACTT CATGCCCGAG
TCGTACTACG CTACGGCCGA CTATGTGAGC ATGCACAACC ATAACACGGG CACGTCTTCG
GACGCTCTGT ACTACGATCC CGTGTGGTTC GGCGGCCTGA GCACCACCAA CAAGATCGGC
TATCGCACGC CCAGCTTCGG TGGGCTGACG GTCGACGCTT CCGTCTCGTT GCATGAGAAA
AACGCTGCCA TTCCGCAAAA GAATGGCTAT GACCTGGCTG CCAACTACAA CATCGGCGCG
CTGAACCTGG GCGCCGGCTA CAGCCAAGTG GACAGCAATC GCCAGCTGGG CCTGCGCGCG
TTGTACACCT TCGGCCAGTT CGTCGTGGGT GGCTACTACC AGCGTAACAA GGACGACAAC
CAGCTCCTCG CCACGGGCGC AGGCAACCGC AACAACTTCC GCTTGGCGGG CGCCTACATG
ATGGGTGCTT CCGAGTTCCA CGTGAACGTG GGCCGCGCTG GCAAGTGGAG CGACATTGCC
GACAGCTCCG CTACGCAGTG GACCCTGGGC TATAACTACA ACTTCAGCAA GCGCACCAAG
GTGTACGCTT TCTACACGAA GGTGGACAAC AAGGCAGGTG CTACCTACAT GACGGGCGCA
GCTGGCCAGG ACTTCAGCTC GCTGGCGCTG GGCGTTCGCC ACAACTTCTG A
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| Protein sequence | MQKPSRLLLA TLALLGTSAV FAQSSVTLYG RVNTSVERQK VGGTSNTVME NNSSRFGFKG
TEDLGGGLKA GFQLESGFNS DTGTGSGWTH PTTGMTFARQ SEVNLSGGFG MIRLGNFMPE
SYYATADYVS MHNHNTGTSS DALYYDPVWF GGLSTTNKIG YRTPSFGGLT VDASVSLHEK
NAAIPQKNGY DLAANYNIGA LNLGAGYSQV DSNRQLGLRA LYTFGQFVVG GYYQRNKDDN
QLLATGAGNR NNFRLAGAYM MGASEFHVNV GRAGKWSDIA DSSATQWTLG YNYNFSKRTK
VYAFYTKVDN KAGATYMTGA AGQDFSSLAL GVRHNF
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