| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2984 |
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| Symbol | |
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| ID | 7385429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3178855 |
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| End bp | 3180303 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643656294 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002554417 |
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| Protein GI | 222112153 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.764123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCACC ACCAGAACAA CTCCCCCATG ATGACGCTGC AACAGGCGTT TGATCTGCTG
CGCGCCCGCA TTCCTGGTGC GCGACTGATC GGCGAAGGTG CCACGCCGCT TGCGCGCGTG
CACACCGATA CCCGCACGCT GGCCGCAGGT GACCTGTTCG TGGCGCTCAA GGGTGAGCGT
TTCGATGCGC ACCAGTTTCT GTCCCAGGCG CGAACGGCCG GCGCCGCGGC GGCCATTGCG
CATGCGGGCC TGGCCGACGC TGGTCTGCCC GGCATCGAGG TACCCGACAC CCTGGCCGCC
CTGGGTGCGC TGGCCACCGG CTGGCGCGCG CAGCGGGATC TGCCGCTGAT CGCCGTGACC
GGCAGCAACG GCAAGACCAC GGTCACGCAA ATGATCGCGG CGGTGCTGCG GGCCTGGAAA
GGCGACGCCG CGCTGGCCAC GCAGGGCAAC TTCAATAACG ACGTGGGCGT ACCCCTCACG
CTGCTGCGCC TGCGGCCGGG CCATGAGGCT GCGGTGGTCG AGTTGGGCAT GAACCATCCC
GGCGAGATCG CGAATCTGGC GGACATTGCC CGGCCCACCG TGGCCCTGGT CAACAACGCC
CAGCGCGAGC ACCTGGAATT CATGCACACG GTCGAGGCCG TGGCGCACGA GAACGGCAGC
GTGCTGTCTG CCCTGCCGGC CGATGGCACG GCTGTGTTCC CGGCGGCAGA TGCCTTCACG
CCCTTGTGGC GCGAGCTGGC CGGCACGCGG CACTGCCTGA CCTTTGGCGA GGCCGCGGGC
GAGGTGCGCT GCGCCGCAGC GCAATGGGGC GATGGCGCAT GGCAGGTGCG CATCGACACC
CCCAACGGCG CATTCGATAC GCGGCTGGCC ATCGCAGGGC GCCACAACGT CACCAATGCC
CTGGCCGCCA CGGCCTGCGC GCTGGCGGCG GGGGGGCCTC TGGCGAGCAT TGCGCGAGGG
CTGGCGGCTT TCGCACCGGT CAACGGGCGC TCGCGCGCAT TGGCCGTGCG TTGCGGGGGG
CGTTCCATCA CGGTGGTGGA CGACAGCTAC AACGCCAACC CCGACTCGGT GCATGCGGCC
ATCGAGGTGT TGGCCGCACT GCCTGGCCCG CGCCTGCTGG TGCTGGGGGA CATGGGCGAG
GTGGGCGACC AGGGGTCGCA GTTCCACGCC GAGGCCGGCG CGCACGCCCG TGTGCGCGGC
ATCGAGCAGC TGTTTGCGCT GGGCGACCTG AGCGCCCACG CCGTGCAGGC CTGTGGGACG
GCCGCACGGC ATTTCAAGGA CATGGCCACG CTGCAGGCCG CAGTGGGGCA GGCCCTGCCC
ACGGTGGGCA GCGTGCTGGT GAAGGGATCG CGATTCATGA AGATGGAACA GGTCGTGCAG
GCGCTGCAGG CACTGCATGA GGACGGCGCC GCAGGCGCTG CCGCGCAAGG GGGAGCCGCA
TGCTGCTGA
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| Protein sequence | MSHHQNNSPM MTLQQAFDLL RARIPGARLI GEGATPLARV HTDTRTLAAG DLFVALKGER
FDAHQFLSQA RTAGAAAAIA HAGLADAGLP GIEVPDTLAA LGALATGWRA QRDLPLIAVT
GSNGKTTVTQ MIAAVLRAWK GDAALATQGN FNNDVGVPLT LLRLRPGHEA AVVELGMNHP
GEIANLADIA RPTVALVNNA QREHLEFMHT VEAVAHENGS VLSALPADGT AVFPAADAFT
PLWRELAGTR HCLTFGEAAG EVRCAAAQWG DGAWQVRIDT PNGAFDTRLA IAGRHNVTNA
LAATACALAA GGPLASIARG LAAFAPVNGR SRALAVRCGG RSITVVDDSY NANPDSVHAA
IEVLAALPGP RLLVLGDMGE VGDQGSQFHA EAGAHARVRG IEQLFALGDL SAHAVQACGT
AARHFKDMAT LQAAVGQALP TVGSVLVKGS RFMKMEQVVQ ALQALHEDGA AGAAAQGGAA
CC
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