| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2973 |
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| Symbol | lpxC |
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| ID | 7385418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3164301 |
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| End bp | 3165224 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643656283 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_002554406 |
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| Protein GI | 222112142 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.143143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTCAGC AACGCACCAT CAAGACCCTG ACCCGCGCTG TGGGCGTAGG CCTGCACAGC
GGCCAGCGGG TCGAGTTGAC GTTGCGTCCG GCACAGCCGG ACACGGGGAT CGTGTTCCGC
CGCGTGGATC TGCCGGAGCC CGTGGACATT CCCATTACCG CCACGGCTGT CGTGGATACG
CGCATGGCCT CGACCATTGG CGCCGGCGGT GCGAAGGTGC ATACCGTGGA GCACCTCATG
TCGGCCTGCG CAGGGCTGGG GCTGGACAAC CTCTACATCG ACATCACGGC GGAGGAGGTG
CCGATCCTCG ACGGATCGTC CGCTTCCTTC GTGTTCCTGC TGCAAAGCGC GGGGGTGGAG
TTGCAGAACG CGCCCAAGCG CTTCATACGC GTCAAACGCC CCGTGGAAGT GCGTGAAGGC
ACGGGCCAGC AGCTCAAGTG GGCGCGGCTG GAGCCCTACC ATGGCTTCAA GCTGCGCTTC
GACATCGACT TCGCCCACCC CGCCGTGGAC TCCACCGGGC AGAGCGCGGA GTTCGATCTG
GGCGAAGGCA ACTACGCGCG CGACATTGCG CGCGCCCGCA CCTTCGGCTT CACGAAGGAC
GTGGAGATGC TGCGCTCCAG CGGCCTGGCG CTGGGTGGCG GGCTGGACAA CGCCATCGTC
ATGGACGACT ACAAGGTGCT CAACGCCGAT GGTCTGCGCT ACGACGCCGA GTTCGCCCGC
CACAAGATCC TCGATGCCAT GGGTGACCTG TACCTCGTTG GCAAGCCGCT GCTGGCGGCC
TATAGCGCCT TCCGCTCGGG CCACGCCATG AACAACCTGC TGTTGCGCGA ACTGCTGGCC
CACGAGGATG CGTGGGAGAT CGTGACCTTC GAGAATGAGC GCCAGGCGCC CGCAGGTTTC
ACACAGCCGG TGCGTGCCTG GTAA
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| Protein sequence | MLQQRTIKTL TRAVGVGLHS GQRVELTLRP AQPDTGIVFR RVDLPEPVDI PITATAVVDT
RMASTIGAGG AKVHTVEHLM SACAGLGLDN LYIDITAEEV PILDGSSASF VFLLQSAGVE
LQNAPKRFIR VKRPVEVREG TGQQLKWARL EPYHGFKLRF DIDFAHPAVD STGQSAEFDL
GEGNYARDIA RARTFGFTKD VEMLRSSGLA LGGGLDNAIV MDDYKVLNAD GLRYDAEFAR
HKILDAMGDL YLVGKPLLAA YSAFRSGHAM NNLLLRELLA HEDAWEIVTF ENERQAPAGF
TQPVRAW
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