| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2832 |
|---|
| Symbol | |
|---|
| ID | 7384943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3016224 |
|---|
| End bp | 3016856 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643656141 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_002554266 |
|---|
| Protein GI | 222112002 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.988429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA TTGGCATTGT GGATGACCAT GCGATAGTCC GTGCCGGGCT GCGCCAATTT
CTCTCGGAAC ATGTGGACCT GCGGGTCGTT GGCGAGGCAA GCAACGGCAG GGAAGCCATT
GATCTGGTGC GCGTTCACGA GATCGACGTG CTGGTGATGG ACCTGTCCAT GCCCGGCCAG
AGTGGCTTGG ATGCGTTGGC CATGCTGCGC GCCAAGGCGC CCGACATGGG CATCCTGATC
CTCAGCGGCT ACCCCGAGGA GCACTATGCG ATCAATCTGA TCCGCCAGGG TGCGAGCGGC
TATCTGAACA AGGAATGCGA GCCCAAGGAG ATCGTGGAGG CCATCCGCAC CATCGCCCTG
GGGCGCCGCT ACCTGACCCC GTCCGTGGCC GACCTGCTGG CCCAGCAGCT CAACCGCAAG
GACGATGCAC CGCCCCACGA GCAGCTGTCG GAGCGCGAGT TCCAGGTGTT CCTCAAGCTG
GCCAAGGGCG AGACGGCGGG TGACATCGCC AAGTCGCTGT CGCTGAGCGT GAAGACCGTG
AGCACCTACC GCACGCGGCT CATGGAAAAG ATGGGGCTGT CCTCCAACAG CGATCTGACG
TACTACGCGC TCAAGAACAA GCTCATCGAT TGA
|
|---|
| Protein sequence | MIKIGIVDDH AIVRAGLRQF LSEHVDLRVV GEASNGREAI DLVRVHEIDV LVMDLSMPGQ
SGLDALAMLR AKAPDMGILI LSGYPEEHYA INLIRQGASG YLNKECEPKE IVEAIRTIAL
GRRYLTPSVA DLLAQQLNRK DDAPPHEQLS EREFQVFLKL AKGETAGDIA KSLSLSVKTV
STYRTRLMEK MGLSSNSDLT YYALKNKLID
|
|---|
| |