| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2709 |
|---|
| Symbol | |
|---|
| ID | 7382188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2884658 |
|---|
| End bp | 2885386 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643656018 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002554144 |
|---|
| Protein GI | 222111880 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.810827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAA AATCCAACAA AATTCTATTG CAGGTCAAGG GCCTGAAGGT GGCCTACGGC
GGCATCCAGG CCGTCAAGGG GGTGGACTTC GAGGTGCGCG AGGGCGAGCT GGTCACGTTG
ATCGGCTCCA ACGGGGCGGG CAAGACCACC ACCATGAAGG CCATCACCGG CACACTGGGC
ATGAACGATG GCGACATCGA GTACCTGGGC CAGAGCATCA AGGGCAAGGG CGCGTGGGAC
CTGGTCAAGC AGGGGCTGGT GATGGTGCCC GAGGGGCGCG GCGTGTTCGC GCGCATGACC
ATCACCGAGA ACCTGCTCAT GGGCGCCTAC ACGCGCGACG ACAAGGCGGG GATTGCCGCC
GACATCGAAA AGATGTTCAC CATCTTCCCG CGCTTGCGCG AGCGCAAGGA CCAGTTGGCG
GGCACCATGT CCGGTGGCGA GCAGCAGATG CTGGCCATGG GCCGCGCGCT GATGAGCCAG
CCCAAGGTGC TGCTGCTGGA CGAGCCCTCC ATGGGACTGT CGCCCATCAT GGTGGACAAG
ATCTTCGAGG TGGTGCGCGA CGTGTACGCC CTGGGCGTGA CCATCGTGCT GGTGGAGCAG
AACGCCAGCC GCGCGCTGGC GATTGCCGAC CGCGGCTACG TGATGGAGTC CGGCCTGATC
ACCATGGCCG GCGGGGGACG GGATCTGCTC AGCGATCCGC GCGTGCGCGC CGCCTACCTG
GGTGAGTGA
|
|---|
| Protein sequence | MAEKSNKILL QVKGLKVAYG GIQAVKGVDF EVREGELVTL IGSNGAGKTT TMKAITGTLG
MNDGDIEYLG QSIKGKGAWD LVKQGLVMVP EGRGVFARMT ITENLLMGAY TRDDKAGIAA
DIEKMFTIFP RLRERKDQLA GTMSGGEQQM LAMGRALMSQ PKVLLLDEPS MGLSPIMVDK
IFEVVRDVYA LGVTIVLVEQ NASRALAIAD RGYVMESGLI TMAGGGRDLL SDPRVRAAYL
GE
|
|---|
| |