| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2669 |
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| Symbol | |
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| ID | 7382147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2840232 |
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| End bp | 2843000 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643655977 |
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| Product | DNA polymerase I |
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| Protein accession | YP_002554104 |
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| Protein GI | 222111840 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.48078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGCC CCAAGACCCT GGTGCTGGTG GATGGCTCCA GCTACCTGTA CCGCGCATTC
CATGCCATGC CCGACCTGCG CGCCGTGCCG GGCGACCCTG CCAGCGCACC CACAGGGGCC
ATCCGCGGCA TGATCAACAT GCTGCAGGCG CTCAAGAAAG AAGTCCCGGC CGACTACGCC
GCCTGCGTTT TCGATGCCAG CGGCCCCACT TTTCGCGATG CGCTGTACCC CGAGTACAAG
CAGCACCGCG CGCCCATGCC CGATGACCTG CGTGCGCAGA TCGAGCCCAT CCACGAGGTG
GTGCGGCTGC TGGGCTGGCC GGTGCTGTGT ATCCCCGGCG TGGAGGCCGA CGACGTGATC
GGCACGCTGG CTGCTACCGC GGCCGGCCAG GGCATGCAGG TGGTGATTTC CAGCGGCGAC
AAGGACCTGA GCCAGCTGGT GAACGAACAC ATCACCATCA TCGACACCAT GAACGGCAAG
AAGCGGGACG TGGCCGGCGT GACCGCCGAG TTCGGCGTGC CCCCGACGCT CATGGTGGAC
TACCAGGCCC TGGTGGGCGA TGCCGTGGAC AACGTGCCCG GCGTGCCCAA GGTCGGCCCC
AAGACCGCCG CCAAATGGCT CACGGAATAC GGTTCGCTGG ATGCGCTGCT GGCCAACGCG
GGCGCCATCA AGGGCGTGGC CGGCGAGAAC CTGCGCGGGG CGCTGGACTG GCTGCCCACC
GCGCGCACGC TGGTCACCAT CAAGACCGAC TGCGACCTGG CGGGCCACCT CGATGGTCTG
CCTGCTATCG ATGCGATAGC TGTTGGCGCT GAGCAGGCGG ACGTGTTGCG CGATTTTTAT
CAAAAGTATG GCTTCAAGAG CCTGGCACGA GCGCTGCCGT CCGCGGTGGT GCCGGATGCT
GGCGCCAGCG GAGACCTCTT CGCCACGCCC GACGCCAGCG CCGTCGCCGT GCAGGCGCAG
CAGCGCGAGG TGACCTACGA CACCATCCTC ACCTGGGAGC AGCTCGACGG CTGGCTCGCG
CGCCTGAAGG CCGCGCCGCT GGCGGCGCTG GACACCGAGA CCACGTCGCT GGACGAGTTG
CGCGCCGAGA TCGTGGGCGT GTCCTTCAGC GTTGAGCCCG GAGCCGCCGC TTACATCCCG
CTGGCGCACA ACGGCCCTGA CGCGCCGCCG CAGCTGCCCT TGGCCGAGGT GCTGGAGCGC
CTGCGCCCCT GGCTGGAAGA CCCGGCCTGC CCCAAGCTGG GCCAGCACGT GAAGTACGAC
CGGCATGTGT TCGCCAACCA CGGCATCCAG GTGCGCGGCT ATGCGCACGA CACCATGCTG
CAAAGCTACG TGCTGGAAGT GCACAAGCCC CATGGCCTGA CCAGCCTGGC CGAGCGCCAC
ACGGGCCGCA CCGGCATCAG CTACGAAGAC CTGTGCGGCA AGGGGGCCAA GCAGATCCCG
TTTGCCCAGG TCCCGGTGGA CAAGGCTGCG GCCTACTCGT GCGAGGACTC CGACCAGACG
CTGGATGTGC ACCGCGTGCT ATGGCCCCAG CTGCAGGCCG ACGACAAGCT GCGCGGCATC
TACGAGCTGG AGATGGCCTG CAGCGAGACC TTGTTTCGCA TCGAGCGCAA TGGCGTGCTG
ATCGACGCGG GCAAGCTGGC CGCCCAGAGC CACGCGCTGG GCCAGCGCAT CCTGCAGCTG
GAGCAGGAGG CGTACGCCAT CGCCGGCCAG CCCTTCAACC TGGGATCGCC CAAGCAATTG
GGTGAAATCT TCTTCGACAA GCTGGGCATG CCCGTGGTGA AGAAGACCGC CACCGGCGCG
CGCAGCACCG ACGAAGAGGT GCTGGAGAAG CTGGCCGAGG ACTACCCGCT GCCCGCCAAA
CTGCTGGAAC ACCGCAGCCT GTGCAAGCTC AAGGGCACCT ACACCGACAA ACTCAGCACG
CTGGCGGACC CGCGCACCGG CCGCGTCCAC ACCCACTACG CGCAGGCCGT GGCCGTCACC
GGGCGGCTGT CCAGCAACGA GCCCAACCTG CAGAACATCC CCATCCGCAC GCCGGAGGGC
CGGCGCGTGC GCGAGGCCTT CGTGGCACCC GCGGGCCGCG TGATTGCCAG TGCCGACTAC
AGCCAGATTG AGCTGCGCAT CATGGCGCAC ATCAGCGGCG ACGAGGCGCT GCTGCACGCC
TTCCGCGAGG GCCTGGACGT GCACCGCGCC ACGGCGGCCG AGGTGTTCGG CGTGGCGCTG
GACCAGGTGA GCAGCGAGCA GCGCCGCTAC GCCAAGGTCA TCAACTTCGG CCTGATCTAC
GGCATGAGCA GTTTCGGCCT GGCCAAGAAC CTGGGCATCG AGACCAAGGC CGCCGCCGCC
TATATCGACC GCTACTTCCA GCGCTACCCC GGCGTGAAGC AGTACATGGA AGAGACCAAG
GCCCAGGCCA AGGCGCGCGG CTACGTGGAG ACGGTGTTCG GCCGGCGCCT GTACCTGCCG
GAGATCAACT CGCCCAACGG CCCGCGCCGC GGCGCGGCCG AGCGCGCCGC CATCAACGCG
CCCATGCAGG GCACGGCGGC CGACCTCATC AAGAAGGCCA TGGTGGCCGT GCAGGGCGAG
CTGGACGCGC GCAAGCCCGA GGTGCTCATG ATCATGCAGG TGCACGACGA ACTGGTGTTC
GAGCTGCCCG AGGGCGAGGT GGACTGGCTG CGCCGTGAGA TCCCGCGCCT GATGGCCGGC
GTGGCCGCGC TGCAGGTACC ACTGCTGGCC GAAGTGGGCG TGGGGCCCGA CTGGGACAAG
GCGCACTGA
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| Protein sequence | MTRPKTLVLV DGSSYLYRAF HAMPDLRAVP GDPASAPTGA IRGMINMLQA LKKEVPADYA
ACVFDASGPT FRDALYPEYK QHRAPMPDDL RAQIEPIHEV VRLLGWPVLC IPGVEADDVI
GTLAATAAGQ GMQVVISSGD KDLSQLVNEH ITIIDTMNGK KRDVAGVTAE FGVPPTLMVD
YQALVGDAVD NVPGVPKVGP KTAAKWLTEY GSLDALLANA GAIKGVAGEN LRGALDWLPT
ARTLVTIKTD CDLAGHLDGL PAIDAIAVGA EQADVLRDFY QKYGFKSLAR ALPSAVVPDA
GASGDLFATP DASAVAVQAQ QREVTYDTIL TWEQLDGWLA RLKAAPLAAL DTETTSLDEL
RAEIVGVSFS VEPGAAAYIP LAHNGPDAPP QLPLAEVLER LRPWLEDPAC PKLGQHVKYD
RHVFANHGIQ VRGYAHDTML QSYVLEVHKP HGLTSLAERH TGRTGISYED LCGKGAKQIP
FAQVPVDKAA AYSCEDSDQT LDVHRVLWPQ LQADDKLRGI YELEMACSET LFRIERNGVL
IDAGKLAAQS HALGQRILQL EQEAYAIAGQ PFNLGSPKQL GEIFFDKLGM PVVKKTATGA
RSTDEEVLEK LAEDYPLPAK LLEHRSLCKL KGTYTDKLST LADPRTGRVH THYAQAVAVT
GRLSSNEPNL QNIPIRTPEG RRVREAFVAP AGRVIASADY SQIELRIMAH ISGDEALLHA
FREGLDVHRA TAAEVFGVAL DQVSSEQRRY AKVINFGLIY GMSSFGLAKN LGIETKAAAA
YIDRYFQRYP GVKQYMEETK AQAKARGYVE TVFGRRLYLP EINSPNGPRR GAAERAAINA
PMQGTAADLI KKAMVAVQGE LDARKPEVLM IMQVHDELVF ELPEGEVDWL RREIPRLMAG
VAALQVPLLA EVGVGPDWDK AH
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