Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2658 |
Symbol | |
ID | 7382136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2821677 |
End bp | 2822579 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643655966 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002554093 |
Protein GI | 222111829 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00312349 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTGA TGCGCAGCAC GCCGGATGCG GGCAGCAGCC AGCGTGCCGT GCACGCCTGG CTGCTGCTGC TTCCGGCCCT GGTCCTGTTG GTGGCCTTCA CGCACTGGCC CACGCTGGCC ACGCTGATCG ACAGCTTCCA TTCCACGCCC CGCGGCGGCC GTGCGGGGGT GTGGGTGGGG CTGGAGAACT ATGCGGCCAT GGTGCACGAC CCCGTGTTCT GGCAGGCCGT GCGCAATAAC CTGTGGTTCG CTGGCGCGAC CATTCCGCTG TCCATCGGCC TGGCGCTGAT CATGGCGCTG TGGGTGAATG AACGCATGGC GGGACGCACG TGGGTGCGCA TGGCGTACTT CACACCCACC GTGCTGCCGA TGATCGCCGT GGCCAACATC TGGCTGTTCT TCTACACGCC GCAGTACGGG CTGCTGGAGC AGATCACCAG CCTGCTCGGG CTGCCGTCGC GCAACTGGCT CGGCGACCCG GCCACGGCGC TGGCCTGCGT CACGGTGGTG GCGGTGTGGA AGGAGGCGGG CTTCTTCATG ATCTTCTACC TGGCCGCGCT GCAGACGCTG AACCCCAGCC TGAAGGAGGC CGCGGCCATC GAGGGCGCGT CGCGCTGGTA CTTCTTTCGC CGCGTGCAGT GGCCGCTGCT CATGCCAACC ACGCTGTTCG TGCTGGTCAA TGCCGTGATC AACGCCTTCC GTCTGGTGGA CCATCTCTTC ATCCTCACGC GCGGCGGGCC GGACAACGCT TCCACGCTGC TGCTGTACCA CCTGTACGAG GTGGGCTTCA AGTTTTGGGA CACGGGCTAT GCCGCGGCGC TCACGGTGGT GCTGGTGGTG GCGCTGGCCG GCGTGGCGCT GGTGCAGTTC TTCGTGTTCG ACAAACGGGT GCATTACCAG TGA
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Protein sequence | MPVMRSTPDA GSSQRAVHAW LLLLPALVLL VAFTHWPTLA TLIDSFHSTP RGGRAGVWVG LENYAAMVHD PVFWQAVRNN LWFAGATIPL SIGLALIMAL WVNERMAGRT WVRMAYFTPT VLPMIAVANI WLFFYTPQYG LLEQITSLLG LPSRNWLGDP ATALACVTVV AVWKEAGFFM IFYLAALQTL NPSLKEAAAI EGASRWYFFR RVQWPLLMPT TLFVLVNAVI NAFRLVDHLF ILTRGGPDNA STLLLYHLYE VGFKFWDTGY AAALTVVLVV ALAGVALVQF FVFDKRVHYQ
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