| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2643 |
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| Symbol | |
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| ID | 7384312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2804028 |
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| End bp | 2807117 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643655951 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_002554078 |
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| Protein GI | 222111814 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGGA TGCTCATCAA TGCCACGCAG CCCGAGGAGC GGCGCCTGGC CATCGTGGAC
GGCCAGAAGC TGCTGGACTA CGAGATCGAG ATCGAAGGGC GCGAGCAGCG CAAGGGCAAC
ATCTACAAAG CCGTCGTCAC GCGCGTGGAA CCGTCGCTGG AGGCCTGCTT CGTTGACTAT
GGCGAAGACC GCCACGGCTT CCTGCCGTTC AAGGAAATCT CCAAACAGTA TTTCGCCGAG
GGCGTATCAC CCAGCCAGGC CAGGATCCAG GACGTGATCA AGGAAGGCCA GGAGCTGATC
GTTCAGGTCG AGAAGGAAGA GCGCGGCAAC AAGGGCGCGG CCCTGACCAC CTTCATCAGC
CTGGCCGGCC GCTATGTGGT GCTGATGCCC AACAACCCAC GCGGCGGGGG CGTGTCGCGC
CGCATCGAGG GCGAGGACCG CGCCGAGCTC AAGGAGGCGA TGGACCAGCT GGAGTACCCC
AAGGGCATGA GCATCATCGC GCGCACCGCC GGCATCGGCC GTTCCGCGCC CGAGTTGCAA
TGGGACCTGA ACTACCTGCT CAAGCTGTGG ACCGCCATCG ATGGCGCCGC CAAGGCCGGC
AAGGGCGCCT TCCTCATCTA CCAGGAATCC AGCCTGGTGA TCCGCGCCAT CCGCGACTAC
TTCAACAGCG ACATCGGTGA CATCCTCATC GACACCGACG ACATCTACGA GCAGGCGCAC
CAGTTCATGG CGCACGTCAT GCCCGAGCAT GCCGGCAAGG TCAAGCGCTA CCGCGACGAC
GCACCGCTGT TCTCGCGCTT CCAGATCGAG CACCAGATCG AATCTGCCTA CGCGCGCACC
GTGACCCTGC CCTCGGGCGG CGCCATCGTG ATCGACCACA CCGAGGCTCT GGTCAGCGTG
GACGTGAACT CGGCACGCGC CATCAAGGGC GGCGACATCG AGGAAACCGC CACGCGCACC
AACCTGGAGG CCGCCGACGA GGTGGCGCGC CAGATGCGCC TGCGCGACCT GGGCGGCCTG
ATCGTGATCG ACTTCATCGA CATGGAGGAG AGCAAGAACC GCCGCGAAGT GGAAAACCGC
CTGCGCGACG CGCTGCGCCA GGACCGCGCC CGCGTGCAGT TCGGCACCAT CAGCAAGTTC
GGCCTCATGG AGATGAGCCG CCAGCGCCTG AAGCCGTCGC TGTCCGAAGG CGCGCATATC
CGTTGCCCGC TGTGCGACGG CACCGGCCAC GTGCGCGACA CGGAAGGCTT CTCGCTGCAG
ATGCTGCGCA TGATCCAGGA AGAGTCCATG AAGGACAGCA CCGCCGCCGT GCACTGCCAG
GTGCCGGTGG AGGTGGCCAG CTTCCTGCTG AACGAAAAGC GCACCGAGAT CGCCAAGATC
GAACTCAAGC AACGCGTCTC CGTGGTGCTG ATCCCCAACA AGTCGCTGGA AACGCCGCAC
TACAAGCTGG AGCGCCTCAA GCACGACGAC CCGCGTCTGG AAAACCTGGA CGCCAGCTAC
AAGCTGGCCG ACGTGGAGGA AGACCAGACC AAGGTCACGC GCCGCTCGCA GGAGCCTACC
AACAAGCAGA CGCCCGTGAT CAAGGGCGTG TTGCCCGATG CACCCGCCCC TGTGGCCGAG
CCGCGCCCCG AAGGCGCCGC CCGCGGCGCC ACGCGCCCGC AGGGCCACGG CCAGCAGCGC
CCGGCAACAG CCCCCACGCC TGCGCCCCAG CGCCCGGCCG CCGCACCGGC GCCCGAGCAG
GGCTTCTTCG CATGGATCAA GAGCCTGTTC GGCTTTGGCG CCGCACCCGC GCCCGCACCT
GTGGCGGCCC CCGCGCAGAC GCCCGCGGAA CCCGGCGCAC GCGGCGAAGG GCGTCGCGGT
GAGCGCGGCG GTCGCCGTGG CGAACGCACT GGTGAACGCA GCGGCGAGCG TGGCGGTGAG
CGCAATGGCA ACCGCGAAGG CGGCGAAGGC CGCGGCCGCC GTAGCGAAGG CCGTGGCGGC
GAGCGCAGCG CCGAGGGCCG CGAGAACCGC GAACCGCGTG AGCCACGCAA TGGCCGCGAC
GGCGAACGCC GTGGCGATCG CGCGGAAGGT GAGAGCCGCC GCGAGCCGCG CGACGGCCGT
GGCGGCCGCG AGCGCGGTGA GCGCAACGCA CAGCCGCCCG TGCAGTCTGC GGCCGATCTG
GCCAACACCC CGGTCACGAC CGATGCCGAC GTGGCAGTGA CCGAGGAGCG CACGGCACGC
ACCGGCGAGC GCGGTGAACG CCGCGAACGG GGTGAACGAG GCGAGCGCCG TGAGCGCGGT
GGCGAACGCG GCGGCGAGCG CCGCGAACGC GGCCCGCGCA CCATCGACGC CAACGCCCCC
GCCGCTGGCG CCGACTTTGC CGACACTGCG CCCCTGGCCG CATTGCCGGA CCTGGACCTG
TCCGGCGCTG AAGTCGGTAC GTCCGGCGCC GAGGCCCCCG CCGGCGAGGA GCGCCGCGAG
CGCCGTTCGC GCGACCGCTA TGGACGCGAC CGCCGCGAAC GTGGCGAGCG CGGCCCGCGC
AATGCCGAGG CCAGCGCCAC CGGTGCCGAT GCCGAAGCGC CTGCCGCGCC GCTGATGGAC
CTGGACCTCC CCGCTCCCGC TGCGCCGGCC GAGGAAGACT CCGCCCCCGC GCGCCGCAGC
TATTTCGCCT CCGCTCCGGC ATCTGCCCCG GCGGCAGCGC CGCAGGCCGC GCCCGAAGCC
ACGGCCGCAG TGACGCCACT CCCGGCCGCC GTGCCAGCCC CCGCACCGGC GCCCGCGCCC
GTTGCAGCGG CACCTGTGCC CGCACCGGCT CCGGCTGCCG CTGCGGTGGC GCCGGCAACC
GGTGGCATGC CGCGCGTGCA GGCATTCACG CTGCCCGTGG ACACGCTGCA GCAGGTGGCG
CAGGCTTCGG GCCTGCAATG GGTGAATTCC GACGCCCAGA AGATCGCCGC CGCGCAGGCC
GCGATTGCGG CCGAGCCCAA GCCCGTCCAC GTGCCGCGCG AGCGTGCGCC CGTGGTGGTG
CTGGATGAAG GTCCGCTGGT GCTGGTGGAA ACCCGCCGCG ACCTGGGCGC GATGCAGCTG
CCGTTCGACC AGGGCAACGC GGCCGCCTAA
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| Protein sequence | MKRMLINATQ PEERRLAIVD GQKLLDYEIE IEGREQRKGN IYKAVVTRVE PSLEACFVDY
GEDRHGFLPF KEISKQYFAE GVSPSQARIQ DVIKEGQELI VQVEKEERGN KGAALTTFIS
LAGRYVVLMP NNPRGGGVSR RIEGEDRAEL KEAMDQLEYP KGMSIIARTA GIGRSAPELQ
WDLNYLLKLW TAIDGAAKAG KGAFLIYQES SLVIRAIRDY FNSDIGDILI DTDDIYEQAH
QFMAHVMPEH AGKVKRYRDD APLFSRFQIE HQIESAYART VTLPSGGAIV IDHTEALVSV
DVNSARAIKG GDIEETATRT NLEAADEVAR QMRLRDLGGL IVIDFIDMEE SKNRREVENR
LRDALRQDRA RVQFGTISKF GLMEMSRQRL KPSLSEGAHI RCPLCDGTGH VRDTEGFSLQ
MLRMIQEESM KDSTAAVHCQ VPVEVASFLL NEKRTEIAKI ELKQRVSVVL IPNKSLETPH
YKLERLKHDD PRLENLDASY KLADVEEDQT KVTRRSQEPT NKQTPVIKGV LPDAPAPVAE
PRPEGAARGA TRPQGHGQQR PATAPTPAPQ RPAAAPAPEQ GFFAWIKSLF GFGAAPAPAP
VAAPAQTPAE PGARGEGRRG ERGGRRGERT GERSGERGGE RNGNREGGEG RGRRSEGRGG
ERSAEGRENR EPREPRNGRD GERRGDRAEG ESRREPRDGR GGRERGERNA QPPVQSAADL
ANTPVTTDAD VAVTEERTAR TGERGERRER GERGERRERG GERGGERRER GPRTIDANAP
AAGADFADTA PLAALPDLDL SGAEVGTSGA EAPAGEERRE RRSRDRYGRD RRERGERGPR
NAEASATGAD AEAPAAPLMD LDLPAPAAPA EEDSAPARRS YFASAPASAP AAAPQAAPEA
TAAVTPLPAA VPAPAPAPAP VAAAPVPAPA PAAAAVAPAT GGMPRVQAFT LPVDTLQQVA
QASGLQWVNS DAQKIAAAQA AIAAEPKPVH VPRERAPVVV LDEGPLVLVE TRRDLGAMQL
PFDQGNAAA
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