| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2640 |
|---|
| Symbol | |
|---|
| ID | 7384309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2801381 |
|---|
| End bp | 2801758 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643655948 |
|---|
| Product | Rieske (2Fe-2S) domain protein |
|---|
| Protein accession | YP_002554075 |
|---|
| Protein GI | 222111811 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTC CGGTGGAGCA ACGCATCGAC CTCTGCCCCA GCGAGGCACT GGTGGATGGC
GGCCGCGCCG TGGCGTTCGA CGTGCGCTAC TGCGGCCAGA TCTGCCGCGC TTTCGCCATC
CGCTATCAGG GCCGCGTGCA CGCCTACCTG AACCGCTGTA CCCATGTACC GATGGAGATG
GACTACCAGG AAGGTCAGTT TTTCGACGAC ACCGGCCGCT GGCTGCTGTG TGCCACGCAT
GGCGCGGCCT ACCAGCCCGA CACGGGAGCC TGCGCTGGCG GTCCGTGTCG CGGCGGGCTG
GTGAAGATCG CCTTGTCCGA GGAAGGGGGC AGGGTGCGCT GGCATACTGC CCTCCATCTG
CACACCGTAG AGTTTTGA
|
|---|
| Protein sequence | MATPVEQRID LCPSEALVDG GRAVAFDVRY CGQICRAFAI RYQGRVHAYL NRCTHVPMEM
DYQEGQFFDD TGRWLLCATH GAAYQPDTGA CAGGPCRGGL VKIALSEEGG RVRWHTALHL
HTVEF
|
|---|
| |