| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2495 |
|---|
| Symbol | |
|---|
| ID | 7384765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2654760 |
|---|
| End bp | 2655329 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643655803 |
|---|
| Product | polyhydroxyalkonate synthesis repressor, PhaR |
|---|
| Protein accession | YP_002553931 |
|---|
| Protein GI | 222111667 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.756407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGCC ATGTACCCGA GGAGCCGCCT GTGCCAGACA AGAACCCAGC ACCTGACCCA
AAAACCGCCC AGCGCGTGAT CAAGAAGTAC CCCAACCGCC GGCTGTACGA CACGTCCACC
TCCACCTATG TCACGCTGGC CGAGGTCAAG CAGCTGGTGA TGCAGGGCGA ATCCGTCGTG
GTGCGCGACG CCAAGACCAG CGAAGACCTC ACGCGCAGCA TCCTGCTGCA GATCATCCTG
GAGGAGGAGG CAGGCGGCGC GCCGATGTTC AGCGAGGCGG CGCTGGCCAA CATCATCCGC
TTCTACGGCC ACGCCATGCA GGGCTTCATG GGCGCGTACC TGGAAAAGAA CGTGCAGATG
TTCACCGAGA TCCAAGCCAA GCTGGCCGAG CAGTCGCAAG GCCTCACGCC CGAGATGTGG
ACGCAATTCA TGAATCTGCA GTCGCCCATG ATGAAGGGGC TGATGGGCAA CTACGTGGAG
CAGTCGCAGA ACATGTTCCT GCAGATGCAG GACCAGATGC AGAAGCAGAC CGAGCAGATG
CTGGGCGCGT TTGGCCTCAA AAAGCGCTGA
|
|---|
| Protein sequence | MTGHVPEEPP VPDKNPAPDP KTAQRVIKKY PNRRLYDTST STYVTLAEVK QLVMQGESVV
VRDAKTSEDL TRSILLQIIL EEEAGGAPMF SEAALANIIR FYGHAMQGFM GAYLEKNVQM
FTEIQAKLAE QSQGLTPEMW TQFMNLQSPM MKGLMGNYVE QSQNMFLQMQ DQMQKQTEQM
LGAFGLKKR
|
|---|
| |