Gene Dtpsy_2484 details

Gene Information

• Locus tag: Dtpsy_2484
• ID: 7384754
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 2641463
• End bp: 2643439
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643655792
• Product: DNA primase
• Protein accession: YP_002553920
• Protein GI: 222111656
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.11513
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAATA CCCCGGTGTC CATCCCCCAG TCGTTCATCC AGGAGTTGCT TGCGCGCGTT 
GACGTCGTCG ATGTGGTCGG CCGCTATGTG CAGCTCAAGA AGAGCGGCGC CAACTTCATG 
GGCCTGTGCC CCTTCCACGG GGAAAAATCA CCCTCATTCA GCGTCAGCCC GTCCAAGCAG 
TTCTTCCACT GCTTTGGCTG TGGCAAGAAC GGCAATGCGA TCGGGTTTCT CATGGACCAC 
GCGGGCATGG GCTTTCGCGA GGCCGTGCAG GACCTGGCCC AGCAGATCGG TATGCAGGTG 
CCCGACGACG AGAACACCTC GCCCCAGGAC CGCGAACGCG CCGCCGCCCA GCGCCAGAAG 
CAGGCCACGC TGACCGACGT GCTGGAGAAG GCCGGCGACG CCTGGCGACG CCACCTGCGC 
GAGTCGCCGC GCGCCGTCCA GTATTTCAAG GGCCGGGGCG TATCAGGCCA GGTAGCCAAG 
CGCTACGGCC TGGGCTACGC GCCGGAGGGC TGGCGGGGCC TGGCCAGCGT GTTCCCCGAG 
TACGACAGCC CGCTGCTGGA GGAAAGCGGC CTGGTGATCG TGAACGACGA AGACGGCAAG 
CGCTACGACC GCTTCCGCGA CCGCGTGATG TTCCCCATCC GCAACGTCAA GGGCGAGTGC 
ATCGGCTTTG GCGGGCGCGT GCTGGGCGAC GACAAGCCCA AGTACCTCAA CTCCCCCGAA 
ACCCCGGTGT TCCACAAGGG CCGCGAGCTC TACGGCCTGT ACGAGGCGCG CAACGCCATC 
CGCGAACACG GCTACGCCCT GGTCACCGAA GGCTACATGG ACGTGGTGGC GCTGGCGCAA 
CTGGGCTTTC CCAATGCCGT GGCCACGCTG GGCACGGCAT GTACGCCCGA GCATGTGCAC 
AAGCTGTTTC GCTTCACCGA CACGGTGGTG TTCAGCTTCG ACGGCGACGC CGCCGGGCGG 
CGCGCGGCGC GCAAGGCGCT GGACGGCGCC CTGCCTTACG CCAGCGACAC GCGCAGCGTG 
AAGTTCCTCT TCCTGCCGGC CGAGCACGAC CCCGACAGCT TCGTGCGCGC CTATGGACCG 
GAGGCGTTCG CGCGCCATGT GGGCGACGCC GTGCCGCTGT CGCGCTTCCT GCTGGAGGCT 
GCGCGCGAGG GCTGCGACCT GGGAACGGCC GAGGGCCGCG CCCACATGCT GAGCAACGCG 
CGCCCGCTGT GGGCAGCGCT ACCCGACGGC GCGCTCAAGC GCCAGTTGCT GACCGAGCTG 
GGTGAACTGG GCCAGTTGCC CGCGCCGGAT CTGGCCCAGC TCTGGGCGCA GGACAGCCCG 
CGCCCCGGCT CCGCCGCGCA CCCGCCCGCG CACGACGGCG CCCCCTTCGG CGACGAGCCG 
CCCTGGGGGC AGGAACCGCC GGGCATGGAA TACGGCAGCC CCGCCGGTGG CGAGCCCGCA 
CGCCGCTGGC GCAAGGGCGG CGAATGGAAG GGCGGGCGCT GGCGCCGCGA AGAGCAGCGC 
CCCCCACAGC CGCCGCTGCC GCGCCGCCCC CTCACGGGGC GCGCCGACCA TGCCGCGCGC 
CTGCTGCTGT CGCACATGGA ATTCCTCGAA GAGCTGTCGC ACGAAGATCA CACCCTGCTG 
TGCGACCAGC CCGCGCCGCA CGGCGCGCTG TTCGTCTGGC TGGAAGGGCA ATTGCACGAG 
CACGGACCAC AGTCCTGGGC GGTGCTGCGC GAGGCCTTGG CAGGCCATGA CTGCCAGGCC 
CTGGCCGAGC GGGTGATGAC TGGCTCCCAC GCCCAGACCG AGGGGGACGA GACCGAGTTG 
CGCGCCGAAC TGCGTGGACT GCTCAACCGC ATGCTCATCG AAGCCATCAA GCTGCAGCAG 
AACGCCCTGA TCGCCGCGGC CTCGCAGGAC CCGGCGGCCA TCGAGCGCTA CCGGCAATTG 
CAGGAGCGCC GCCGCGCGCT GGAAGAGGGG CTTACAAAAA TGACCTCAGG GGCTTGA 

 

Protein sequence

MENTPVSIPQ SFIQELLARV DVVDVVGRYV QLKKSGANFM GLCPFHGEKS PSFSVSPSKQ 
FFHCFGCGKN GNAIGFLMDH AGMGFREAVQ DLAQQIGMQV PDDENTSPQD RERAAAQRQK 
QATLTDVLEK AGDAWRRHLR ESPRAVQYFK GRGVSGQVAK RYGLGYAPEG WRGLASVFPE 
YDSPLLEESG LVIVNDEDGK RYDRFRDRVM FPIRNVKGEC IGFGGRVLGD DKPKYLNSPE 
TPVFHKGREL YGLYEARNAI REHGYALVTE GYMDVVALAQ LGFPNAVATL GTACTPEHVH 
KLFRFTDTVV FSFDGDAAGR RAARKALDGA LPYASDTRSV KFLFLPAEHD PDSFVRAYGP 
EAFARHVGDA VPLSRFLLEA AREGCDLGTA EGRAHMLSNA RPLWAALPDG ALKRQLLTEL 
GELGQLPAPD LAQLWAQDSP RPGSAAHPPA HDGAPFGDEP PWGQEPPGME YGSPAGGEPA 
RRWRKGGEWK GGRWRREEQR PPQPPLPRRP LTGRADHAAR LLLSHMEFLE ELSHEDHTLL 
CDQPAPHGAL FVWLEGQLHE HGPQSWAVLR EALAGHDCQA LAERVMTGSH AQTEGDETEL 
RAELRGLLNR MLIEAIKLQQ NALIAAASQD PAAIERYRQL QERRRALEEG LTKMTSGA