| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2483 |
|---|
| Symbol | |
|---|
| ID | 7383985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2639735 |
|---|
| End bp | 2641381 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643655791 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_002553919 |
|---|
| Protein GI | 222111655 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.279875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCA TGTACGACCA GAATCTGCCG CGCACCGAAG CCAACCATGC GCCGCTGTCG
CCCCTGTCCT TCATCGAACG CACGGCCGAG GTCTACCCCG ACCGCCTGGC TATCGTGCAT
GGCGAGCTGC GCCAGACCTG GGGGCAGACC TACGCGCGCT GCCGCCGCCT GGCCAGCAGC
CTGCGCCGCG CGGGCATCGG CAAGAACGAC ACCGTGGCCG TGATGCTGCC CAACACCCCG
CCGATGGTGG AGGCGCACTT CGGCGTGCCC ATGGCGGGCG CGGTGCTCAA TGCGCTGAAT
ACCCGGCTGG ACCCGGAGAC CATCGCCTTC ATGCTGGACC ACGGCGAGGC CAAGGCGGTG
ATCGTGGACC CTGAATTCGC CCCCGTGATG GCCAAGGCGC TGGCGCTGCG CCAGTCGCAG
GCGCCGCTGC TGCTCATCGA CGTGGAAGAC GCCGTGTACG GCCCGGCCGC GCAGCGCCTG
GGCACGCTGA CGTACGAGGA CTTCCTGGCC CAGGGTGACG CGCAGTTCGC GTGGGAACTG
CCCGGCGACG AGTGGGACGC CATCGCACTC AACTACACCT CGGGCACCAC GGGCAACCCC
AAGGGCGTGG TCTACCACCA CCGCGGCGCG CACACCAATG CCGTCAGCAA CGTGCTGGAG
TGGGACATGC CCAAGCATGC CGTCTACCTC TGGACGCTGC CCATGTTCCA CTGCAACGGC
TGGTGCTTTC CCTGGACGGT GGCGGCGCGC GCGGGCGTCA ATGTGTGCCT GCGCCGGGTC
GAGGCGCAGG CCATCTTCGA CGCCATCCGC AACCACGGCG TCACACACTA CTGCGGCGCG
CCCATCGTGC ATGGCCTGCT GGTCAACGCG CCTGCGGCGA TGAAGGAGGG CGTTCCCGCG
GGCGTGAAGG CCATGGTGGC CGGGGCAGCG CCGCCGGCCT CGATGATCGA GGGCATGGAG
CAGATGGGGT TCGACCTGAC CCATGTGTAC GGCCTCACGG AGGTATACGG CCCGGCCACC
GTCTGCGCCA AGCACGCGGC CTGGGACGCG CTGGACATCG GCGAGCGTGC GCGCCTCAAT
GCCCGCCAGG GCGTGCGCTA CCACCTGCAA CGCGCGGCCA TGGTGCTCAA CCCAGACACC
ATGGAGCCCG TGCCGCACGA CGGCGAGACC ATGGGCGAGA TCATGTTCCG CGGCAACATC
GCCATGAAGG GCTACCTGAA GAACCCCAAG GCCACCGAGG AGGCCTTCCG TGGCGGCTGG
TTCCACAGTG GTGACCTGGC GGTGCAGTAC CCCGACGGCT ACATCAAGAT CAAGGACCGC
AGCAAGGACA TCATCATCTC GGGCGGCGAG AACATCTCCT CCATCGAGGT GGAGGACGTT
CTCTACCGCC ACCCCGACGT GCTGGCCGCC GCCGTGGTCG CCAAGCCCGA CCCCAAGTGG
GGTGAGACGC CCTGCGCCTT CGTGGAGCTG AAGGCGGGCG CGCAGGCCAC GCCTGAGGAC
ATCGTGGCGC ACTGCAAGAA GCACCTGGCG GGCTTCAAGG TGCCGCGTGC CGTGGTGTTC
GGCGAGTTGC CCAAGACCAG CACCGGCAAG ATCCAGAAGT TCGAGCTGCG CAAGCAGGCG
GGATCGGCCG CGGCCATCAA CGTCTGA
|
|---|
| Protein sequence | MTSMYDQNLP RTEANHAPLS PLSFIERTAE VYPDRLAIVH GELRQTWGQT YARCRRLASS
LRRAGIGKND TVAVMLPNTP PMVEAHFGVP MAGAVLNALN TRLDPETIAF MLDHGEAKAV
IVDPEFAPVM AKALALRQSQ APLLLIDVED AVYGPAAQRL GTLTYEDFLA QGDAQFAWEL
PGDEWDAIAL NYTSGTTGNP KGVVYHHRGA HTNAVSNVLE WDMPKHAVYL WTLPMFHCNG
WCFPWTVAAR AGVNVCLRRV EAQAIFDAIR NHGVTHYCGA PIVHGLLVNA PAAMKEGVPA
GVKAMVAGAA PPASMIEGME QMGFDLTHVY GLTEVYGPAT VCAKHAAWDA LDIGERARLN
ARQGVRYHLQ RAAMVLNPDT MEPVPHDGET MGEIMFRGNI AMKGYLKNPK ATEEAFRGGW
FHSGDLAVQY PDGYIKIKDR SKDIIISGGE NISSIEVEDV LYRHPDVLAA AVVAKPDPKW
GETPCAFVEL KAGAQATPED IVAHCKKHLA GFKVPRAVVF GELPKTSTGK IQKFELRKQA
GSAAAINV
|
|---|
| |