Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2479 |
Symbol | |
ID | 7383981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2635018 |
End bp | 2635638 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643655787 |
Product | Tripartite ATP-independent periplasmic transporter DctQ component |
Protein accession | YP_002553915 |
Protein GI | 222111651 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.447781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAC TCTTACTCGG CATCGATGCC GTGTCCACCT TCATCGGCAA GGCGGCGGCC TGGGCCGTCG TGGGCCTGAC GGCCCTGATC TGCTGGGAGG TCTTCTCGCG CTACGCGCTG AACAACCCCC ATGCCTGGGT GCTGGACGCA CAGATCATGC TGTACGGCAC CATGTTCATG CTGGCGGGCG CCTACACCCT GGCCAAGAAC GGCCACGTGC GCGGCGACGT GCTGTACGGC TTCTTCAGCC CGCGCGTGCA GGCCGGGCTG GACCTGCTGC TCTACATCCT GTTCTTCCTG CCGGGCGTGC TGGCCATGAC CTGGGCCGGC TGGACCTATG CGCAGGAATC GCTGGCCATC CGCGAGCAGA CGTTCTCCGC CACGCCGCTG CCGCTGTACC CCTTCAAGTT CGTGATTCCC CTGGCGGGCG CCGTGCTGCT GCTACAGGGG CTGGCGGAGA TCGCGCGCTG CGTGATCTGC CTGCGCCAGG GCGCGTGGCC CCGGCGCGGC GAGGACGTGG AAGAGGTGGA CGTCGAGAAG CTCAAGGAGA TGGTGCACGT GAACGACAGC GACCTGCAGG TGCCGGCTTC CGCATCCGCC GCACAGGGGG GCAAGCCATG A
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Protein sequence | MQKLLLGIDA VSTFIGKAAA WAVVGLTALI CWEVFSRYAL NNPHAWVLDA QIMLYGTMFM LAGAYTLAKN GHVRGDVLYG FFSPRVQAGL DLLLYILFFL PGVLAMTWAG WTYAQESLAI REQTFSATPL PLYPFKFVIP LAGAVLLLQG LAEIARCVIC LRQGAWPRRG EDVEEVDVEK LKEMVHVNDS DLQVPASASA AQGGKP
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