Gene Dtpsy_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2452 
Symbol 
ID7383954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2605524 
End bp2606546 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content64% 
IMG OID643655760 
Productporin Gram-negative type 
Protein accessionYP_002553888 
Protein GI222111624 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCGCC ATTTGATCGC CCTTGCCGCC GCCACGCTGT GCGCGGCCAC GGCGCACGCC 
CAAACCTCCG TCACGCTTTC GGGTCTGACC GACGTCTACG TCGGCTCCAT GAAGATGGCC
GGCGACGCCG ACCGCAGCTC GGTGGTCAAC AGCGGTGGCA TGACCACCTC GTGGTTCGGC
TTCACCGGCT CCGAAGACCT GGGCGGCGGC TTGAAGGCCA ACTTCCAGCT CACCTCGTTC
ATCCAGGTGG ATGCCGGCAC CCAGGGCCGC TTTCCGGGCG ATACGTTTTT CTCGCGCGAC
GCCAACGTGA GCCTGTCGGG CAGTTTTGGC TCCGTGCTGC TGGGCCGCTG GATGGCACCC
AACTTCCTGC CGTCCGTGGT GGGCAACCCG CTGGGCGACT CGTTCACGTT CTCGCCGCTG
ATCCTGCACA AGAACGTGCC GCTGTTCAAC GCCTCCGGCT GGCAGGCCAC CACCCCGTCC
GACACAGGCT GGAGCAACCA GATCGCCTAC AGCACGCCCG ACATCGGCGG CTTCAAGGCC
AACCTGCAGT ACCAGTTCGG CGAACTGCCG GGCGATAACG GCAAGAAGAA CGTCGGCGCT
AATTTCTTCT ACTTCGGCGG CCCGCTGACG CTGACTGGCT ACTACGAGCG CGACCAGATC
AGCAACCCCG GCCAGGGCAC CTACCTGGGC ACGACCAAGA AGGACTGGAT GCTGGCCGCA
GCCTACGATT TCAACGTCGT GAAGCCGTAC CTGAGCTACG GCCAGACCAA GGCCGACAAC
AGCCCCGGCA AGGCCAAGAC GATGCAGGTC GGCGCATCGG CCCCGCTGGG CGGCGGCAGC
CTGTTGGCTT CCTGGGTCAA GACCGAGCTG ACGGACTCGG ACCTGGACCG CAAGACCTTC
ACGCTGGGCT ATGACTACAA CCTGTCCAAG CGCACGGACG TGTACGCGAT GTACATGAAC
GACAAGATCA CCAACCAGTC CACGGGCAAC AGCTTCGGCG TGGGCATCCG CCACCGGTTC
TGA
 
Protein sequence
MYRHLIALAA ATLCAATAHA QTSVTLSGLT DVYVGSMKMA GDADRSSVVN SGGMTTSWFG 
FTGSEDLGGG LKANFQLTSF IQVDAGTQGR FPGDTFFSRD ANVSLSGSFG SVLLGRWMAP
NFLPSVVGNP LGDSFTFSPL ILHKNVPLFN ASGWQATTPS DTGWSNQIAY STPDIGGFKA
NLQYQFGELP GDNGKKNVGA NFFYFGGPLT LTGYYERDQI SNPGQGTYLG TTKKDWMLAA
AYDFNVVKPY LSYGQTKADN SPGKAKTMQV GASAPLGGGS LLASWVKTEL TDSDLDRKTF
TLGYDYNLSK RTDVYAMYMN DKITNQSTGN SFGVGIRHRF