| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2449 |
|---|
| Symbol | |
|---|
| ID | 7383951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2599851 |
|---|
| End bp | 2602256 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643655757 |
|---|
| Product | xanthine dehydrogenase, molybdopterin binding subunit |
|---|
| Protein accession | YP_002553885 |
|---|
| Protein GI | 222111621 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
|---|
| TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG ATGACGACCA CGCTCCCACT GCGCGCACGC CCGTTGGCCG CGCGGCCGCT
GGCAACCCAA CGGTCATGAC CCAACCCGCG ATGGGCCAGC CCGCCATGGG CCAGCCCGCC
ATGGGCCAGC CCCACGCGCA CGAGAGCGCA CGCGCACAGG TGGTGGGCAG CGCCTACTAC
ATCGACGACT TGCCCGAGGT AAAGGGCACG CTCTACGCCG CCCCCATCCT CAGCACCGTG
GCGCACGGGC GGCTGGAAGG CGTGGACACG CAAGCCGCAC TGCAGCTTGC GGGCGTGCAC
GGCGTGGTGC TGGCACAGGA CATTCCGGGC GATCCGGTAC TGGCGGCGTT CGCCCATGAT
GAGCCGGTGT TCGCGCAGGC TACGGTGCAA CACATCGGCC AGGTGATCGG CCTGGTGGTG
GCCGAGTCGG TCATGCAGGC GCGGCGCGCG GCGCGGCAGG TGAAGCTGAG CATCACCCCC
CTGCCCGCCA TCCTCACCGT ACAGGACGCC TTGGCCGCCG AGAGCTATGT TCTACCGCCC
GTGCACGTAC GCCGGGGCGA CGCGGCCCAG GCGCTGGCGC AGGCGCCGCA CCGCCTGCAG
GGGCGACTGG AAGTCGGCGG GCAGGAGCAT TTCTATCTGG AGGGTCAGAT CGCCTATGCC
CTGCCGCAGG AACAGGGACA GTGGCTGATC CACTCCAGCA CCCAGCACCC CGGCGAGGTG
CAGCACTGGG TGGCGCATGC GCTGGGCATC GACAGCCACG CGGTGCGCGT GGAGTGCCGG
CGCATGGGCG GCGGCTTTGG CGGCAAGGAA ACGCAGGCCG GCCACCTGGC CGTGTGGGCG
GCGCTGGCGG CGCACAAGTT CGGCCGGCCC GTCAAGCTGC GCCTGGACCG CGACGACGAC
TTCATGGTCA CCGGCAAGCG CCACCCCTTC GCCTACGAAT GGGACGTGGG CTTTGACGAC
GCCGGGCGCA TCACCGGCCT CAAACTGATG ATGGCCGCCA ACTGCGGCTT CAGCGCCGAC
CTGTCGGGCC CCGTGGCCGA CCGCGCGGTG TTCCACTGCG ACAACGCGTA CTTCCTGGAG
CATGTGGAAA TCGCCTCGTA CCGCTGCAAG ACGCACACCC AGAGCCATAC CGCGTTCCGC
GGCTTTGGCG GACCGCAGGG GGTGATCGCC ATCGAAACCA TTCTGGGCGA CATCGCCCGC
GCCCTGGGCC GGGACGCGCT GGACGTGCGC ATGGCCAACC TCTACGGGCT GCACGAGCGC
AACGTGACCC ACTACCAGAT GACCGTGGAG GACAACATCC TGCACGATTT GCTACCGCAA
TTGGAGCAGT CCGCGCTCTA CAGGCAACGG CAGGAGGCCG TTTTGGCATG GAATGCCGCG
AACCCCGTGC TCAAGCGCGG CTTGGGCCTG ACGCCGGTAA AGTTCGGCAT CAGCTTCACG
GCCACGCTGT TCAACCAGGC CGGGGCGCTG GTGCATGTGT ACACCGACGG CAGCGTGCAG
GTGAACCACG GTGGCACCGA GATGGGCCAG GGCCTGCACA CCAAGGTGGC GCAGATCGTG
GCCGATGAGC TGGGCGTGCC CCTCTCCCGC GTGCTGGTCA CCGCAAGCGA CACCGCCAAG
GTGCCCAACG CCAGCGCCAC CGCCGCCAGC AGCGGCACCG ACCTGAACGG CCGCGCCGCG
CAATTCGCGG CGCGCCATGT GCGCGACAAC CTGGCGGCGT TCGTCTGCGG GCTGGACGGC
TGCGGCGCGG GCGCCATCCG CTTCGCGGGT GGGCAGGTCA TATCCCCAAA GCGCACGCGG
CGCTGGGAGG ACGTGGTGAA GGAGGCCTAC GCCAACCGCA TCCAGCTGTG GAGCGACGGC
TTTTACCGCA CGCCCAAGAT CCACTACGAC AAGACCACGC TCACCGGCCG GCCCTTCTAC
TACTTCGCCT ATGGCGCCGC CTGCACCGAG GTGGCCATCG ACACCCACAC CGGCGAGAGC
CGCGTGCTGG CCGTGGACAT CCTGCACGAC GTGGGCCACA GCATCAACCC GGCCATCGAC
CTCGGCCAGA TCGAGGGCGG TTTCGTGCAG GGCATGGGGT GGCTTACCAC CGAGCAGCTG
GTGTGGAACG ACGAAGGGCG CCTGGCCACG CACGCCCCCA GCACCTACAA GATCCCCGCC
ACGGGCGACG TGCCCGAGCA CCTGCGCGTG CAGCTGTGGC ACCAGCCCAA CCGCGAGGAC
AACGTGGGCG GCAGCAAGGC CGTGGGCGAG CCCCCGTTCA TGCTGGCCAT CAGCGTGTAC
GAAGCACTGC GCAATGCAAT CGCTGCGGCC CGGGGGGACG GCGGCGCCGA TGCGCGCGCG
CCCGTGCAAC TGAGCGCGCC CGCCACGGCA GAAAACGTGC TGCGCGCGAT CGGGCGGCTG
GAGTAA
|
|---|
| Protein sequence | MKRDDDHAPT ARTPVGRAAA GNPTVMTQPA MGQPAMGQPA MGQPHAHESA RAQVVGSAYY
IDDLPEVKGT LYAAPILSTV AHGRLEGVDT QAALQLAGVH GVVLAQDIPG DPVLAAFAHD
EPVFAQATVQ HIGQVIGLVV AESVMQARRA ARQVKLSITP LPAILTVQDA LAAESYVLPP
VHVRRGDAAQ ALAQAPHRLQ GRLEVGGQEH FYLEGQIAYA LPQEQGQWLI HSSTQHPGEV
QHWVAHALGI DSHAVRVECR RMGGGFGGKE TQAGHLAVWA ALAAHKFGRP VKLRLDRDDD
FMVTGKRHPF AYEWDVGFDD AGRITGLKLM MAANCGFSAD LSGPVADRAV FHCDNAYFLE
HVEIASYRCK THTQSHTAFR GFGGPQGVIA IETILGDIAR ALGRDALDVR MANLYGLHER
NVTHYQMTVE DNILHDLLPQ LEQSALYRQR QEAVLAWNAA NPVLKRGLGL TPVKFGISFT
ATLFNQAGAL VHVYTDGSVQ VNHGGTEMGQ GLHTKVAQIV ADELGVPLSR VLVTASDTAK
VPNASATAAS SGTDLNGRAA QFAARHVRDN LAAFVCGLDG CGAGAIRFAG GQVISPKRTR
RWEDVVKEAY ANRIQLWSDG FYRTPKIHYD KTTLTGRPFY YFAYGAACTE VAIDTHTGES
RVLAVDILHD VGHSINPAID LGQIEGGFVQ GMGWLTTEQL VWNDEGRLAT HAPSTYKIPA
TGDVPEHLRV QLWHQPNRED NVGGSKAVGE PPFMLAISVY EALRNAIAAA RGDGGADARA
PVQLSAPATA ENVLRAIGRL E
|
|---|
| |