| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2369 |
|---|
| Symbol | |
|---|
| ID | 7383229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2521421 |
|---|
| End bp | 2521984 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643655677 |
|---|
| Product | alkyl hydroperoxide reductase subunit C |
|---|
| Protein accession | YP_002553806 |
|---|
| Protein GI | 222111542 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0450] Peroxiredoxin |
|---|
| TIGRFAM ID | [TIGR03137] peroxiredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0383671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTGC TTAACACCAC TATCAAGCCT TTCAAGACGC AAGCCTTCAA GAACGGCAAG
TTTGTCGAAG TGACCGAGAA GGACGTCCTG GGCAAGTGGG CCGTGTTCTT CTTCTACCCG
GCCGACTTCA CCTTCGTGTG CCCCACCGAG CTGGGCGACG TGGCCGACCA CTACGACGAG
CTGCAGAAGC TGGGTGTTGA GGTGTACTCC GTGTCCACCG ACACGCACTT CGTGCACAAG
GCATGGCATG ACGCCTCCGA CACGATCCGC AAGATCAAGT ACACCATGCT GGGCGACCCC
ACCTGGCAAA TCAGCCAGAA CTTCGACTGC CTGCGCGAAG GCCAGGGCCT GGCAGACCGC
GCCACGTTCA TCGTGGACCC CCAGGGCGTG ATCCAGGCGA TGGAAATCAC CGCCGAAGGC
ATCGGCCGCA ACGCCGCCGA TCTGCTGCGC AAGGTCAAGG CCGCCCAGTA CGTGGCATCG
CATCCTGGCG AAGTTTGCCC CGCCAAGTGG GAAGAGGGCG CCAAGACGCT GGCTCCTTCG
CTGGACTTGG TCGGCAAGAT CTAA
|
|---|
| Protein sequence | MSVLNTTIKP FKTQAFKNGK FVEVTEKDVL GKWAVFFFYP ADFTFVCPTE LGDVADHYDE
LQKLGVEVYS VSTDTHFVHK AWHDASDTIR KIKYTMLGDP TWQISQNFDC LREGQGLADR
ATFIVDPQGV IQAMEITAEG IGRNAADLLR KVKAAQYVAS HPGEVCPAKW EEGAKTLAPS
LDLVGKI
|
|---|
| |