Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2326 |
Symbol | |
ID | 7383186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2473662 |
End bp | 2476829 |
Gene Length | 3168 bp |
Protein Length | 1055 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643655634 |
Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
Protein accession | YP_002553763 |
Protein GI | 222111499 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.155904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCAGT TCTTCATCAA CCGCCCCATC TTCGCGTGGG TGCTGTCCAT CATCATCATG CTGGCGGGCG GCCTGGCGAT CTTCACGCTG CCGCTGGAGC AGTACCCCGA CATCGCGCCG CCGCGCGTGA CCATCTCCGC GCAGTACACG GGCGCCTCGG CCGAGACCGT GGAAAACTCG GTCACGCAGA TCATCGAGCA GCAGCTCAAG GGCATCGACA ACATGATCTA CATGGGCTCG ACGTCGGATG CGTCGGGCCG ATCGGCCACC ACCCTCACGT TTGCGCCGGG CACCAACATC GACGTGGCCC AGGTGCAGGT GCAGAACAAG CTGCAGTCGG CCATGAACCG CCTGCCCGAT GCCGTGAAGA GCCGGGGCGT GTTCGTCAAC AAGGGCGGCC AGGACTACCT GGTCACCTAC AGCTTCTTCT CGGGCGACCC GAATATGAGC GCGGTGGACA TCGGGGACTA CCTGAACTCC AACCTCGTGG ACGTGATCGG CCGCCTGGAT GGCGTGGGCG ACATCCGCGT GTTCGGCACC TTCTACGCCA TGCGCCTGTG GATGGACCCG GCCAAGATGG AGAAATTCCA GCTCATGCCG TCGGACCTGA TCAGCGCGCT GAACGCGCAG AACGCACAGG TCTCGGCCGG CCAGCTCGGC GCGCTGCCCG CCGTGCCCGA CCAGCAGCTC AACGCCACCA TCACCGCGCG CACCAAGCTG CAGACGGTGC AGGAGTTCGA GGACATCGTG CTCAAGACCG CCACCGACGG TTCGGTGGTC ACGGTGAAGG ACGTCGCGCG CGTGGAACTG GGCCCCGACA ACCTGTCGGT CAAGGCCAAG CTCAACGGCC GCCCGGGCGC GGGCATGGGC ATCGTGCTGG CCGACGGCGC CAACGCCATG GCGGTGTCGG ACGCCGTGGC CGCCAAGCTG GCGGAGCTCA AGCCCTACTT CCCCAACCAG ATCGACTATT TCGTCAGCTC CGACTCCACG CCCTTCGTGC GCGCCTCGAT CCGCGAAGTG GCCACCGCGC TGGGCGAGGC CATGGTGCTG GTGGTGATCG TGATGTTCAT CTTCCTGCAG AACTTCCGCG CCACGCTGAT CCCTGCGATC GCCGTGCCAG TGGTGCTGCT GGGCACCTTC GGCGTGCTGG CCGCGGCGGG TTACTCGATC AACACGCTGA CCATGTTCGC GCTGGTGCTG GCCATCGGCC TGCTGGTGGA CGACGCCATC GTGGTGGTGG AGAACGTCGA GCGCGTGATG CACGAGTCGG GTCTCTCGCC CAAAGAGGCC ACGCGCCACT CGATGCGCGA GATCACGCCC GCGCTGGTGG GCATCGGCCT CACGCTGTCG GCGGTGTTCG TGCCGATGGC GTTCTTCGGC GGCTCCACGG GGGTGATCTA CCGGCAGTTC TCCATCACCA TCGTGGCGGC GATGGCGCTG TCGGTGCTGG TGGCGCTCAC GCTCACGCCG GCGCTGTGCG CCAGCATCCT CAAGCCGTCC GCCCACCTGG GCAAGGACCC GCAGGTGCGC CGCGGCCTGC TGGGGCTGAA CGACCGCTTC TTCGTCTGGT TCAACCGCCA CTTCGAGACC AACACGCTGC GCTACCAGCG CGGCGTGGGC TGGATGCTGC ACCGCGCCAA GCGCATGCTG CTGATCTTTG CCGCCATCTG CCTGGCCGTG TGGTGGATCA TCGGCCGCGT GCCGACGGCC TTCCTGCCCG ATGAAGACCA GGGCTACATC CTGGCCAACG TCAACCTGCC CGCTGGAGCC ACCGACGCGC GACTGCAGGA CGTGCTGGAC CAGGTGAATC TGTACTTCAA GGACGTGCCC GAGGTCATCA GCTTCAACCA GGTCTCGGGC CTGAACGGCG ACCAGAGCTC GGCGCGCGCA TTCATCCGCC TCAAGCCCTG GGACCAGCGG CCGCTGGCCA GCCAGTCCGC GGCGGCCATC GCCCACCGCG CCACCCAGGA GCTGGCCAAG ATCCGCGACG CGCGCATCTT CGTGTCGCAG CCGCCGGCCG TGCGCGGCCT GGGCTCCAAC GCGGGCTTCA ACTTCATGCT CAAGGACATC AACGGCCTGG GGCACGAGGC GCTGCTGGCC GCCAAGGACC GGTTCCTGGC CGAGGCGCGC AAGCACCCCG AGCTGACCAA CCTGCGCACC ACCAACCTAG ACGACGCCAC CGAGCTGCGC CTGGACATCG ACGACCGCAA GGCCGCCGCG CTGGGCCTGA ACTACGACGC CATCAACAGC GTGCTCTCCA GCGGCATGGG CGGCACCTAC GTGAACGACT TTCTGAACAA CGGCCGCGTC AAGCGCGTCT ACATCCAGGG CGACGCGCCG CACCGCATGC TGCCGCAGGA CATCGGCAAG TGGACCGTGC GCAACAAGAA CGGCGAGATG GTGCCGTTCG GCGCCTTCTC CAAGGCCCAC TGGGCTTATG GCTCGCCGCA GCTCATGCGC TACAACGGCG CGCCCGCCTA TGAGATGGTG GGCAGCGCCG CGCCGGGCGT CAGCTCGGGC GTGGCCATGA AGATCGTGGA GGACATCCTC AAGGGCCTGC CGCCCGGCAT TGCGTACGAA TGGACGGGCG CCTCGCTGCA GGAGCGCCAA TCCGGCGCGC AGGCGCCGCT GCTGTACGCC ATCTCGATCC TGTTCGTGTT CCTGTGCCTG GCCGCGCTGT ACGAGAGCTG GACCGTGCCC CTGTCGGTGA TGCTGGCCGT GCCGCTGGGC GTGCTGGGCG CGCTGCTGGC GACCTGGACG CGGGGCCTGG CCAACGACGT GTACTTCCAG GTCGGCCTGA TCACCACGGT GGGCCTGGCC TCCAAGAACG CCATCCTGAT CGTCGAGTTT GCCGTGCAGT TGCAGGAACA GGGCCGCAAG CTGCTGGATG CCACGCTGGA AGCCGTGCGC ATGCGCCTGC GCCCCATCCT CATGACATCG CTGGCCTTCG GCTTCGGCGT GGTGCCGCTG GCCCTGGGCA CGGGCGCCGG CGCAGGCGGG CGCAACGCCA TCGGCACGGC CGTGCTGGGC GGCACCGTGG CCTCCACGGT GCTGGGCATC TTCATGGTGC CGGTGTTTTT CCTGCTGATC CGCAGCTGGT TCAAGAGCCG CTCGCGCCAG GAAGACGCGG CCCAGCCTGC CCCCATCCAT CCGGAGAGTG CCGCATGA
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Protein sequence | MAQFFINRPI FAWVLSIIIM LAGGLAIFTL PLEQYPDIAP PRVTISAQYT GASAETVENS VTQIIEQQLK GIDNMIYMGS TSDASGRSAT TLTFAPGTNI DVAQVQVQNK LQSAMNRLPD AVKSRGVFVN KGGQDYLVTY SFFSGDPNMS AVDIGDYLNS NLVDVIGRLD GVGDIRVFGT FYAMRLWMDP AKMEKFQLMP SDLISALNAQ NAQVSAGQLG ALPAVPDQQL NATITARTKL QTVQEFEDIV LKTATDGSVV TVKDVARVEL GPDNLSVKAK LNGRPGAGMG IVLADGANAM AVSDAVAAKL AELKPYFPNQ IDYFVSSDST PFVRASIREV ATALGEAMVL VVIVMFIFLQ NFRATLIPAI AVPVVLLGTF GVLAAAGYSI NTLTMFALVL AIGLLVDDAI VVVENVERVM HESGLSPKEA TRHSMREITP ALVGIGLTLS AVFVPMAFFG GSTGVIYRQF SITIVAAMAL SVLVALTLTP ALCASILKPS AHLGKDPQVR RGLLGLNDRF FVWFNRHFET NTLRYQRGVG WMLHRAKRML LIFAAICLAV WWIIGRVPTA FLPDEDQGYI LANVNLPAGA TDARLQDVLD QVNLYFKDVP EVISFNQVSG LNGDQSSARA FIRLKPWDQR PLASQSAAAI AHRATQELAK IRDARIFVSQ PPAVRGLGSN AGFNFMLKDI NGLGHEALLA AKDRFLAEAR KHPELTNLRT TNLDDATELR LDIDDRKAAA LGLNYDAINS VLSSGMGGTY VNDFLNNGRV KRVYIQGDAP HRMLPQDIGK WTVRNKNGEM VPFGAFSKAH WAYGSPQLMR YNGAPAYEMV GSAAPGVSSG VAMKIVEDIL KGLPPGIAYE WTGASLQERQ SGAQAPLLYA ISILFVFLCL AALYESWTVP LSVMLAVPLG VLGALLATWT RGLANDVYFQ VGLITTVGLA SKNAILIVEF AVQLQEQGRK LLDATLEAVR MRLRPILMTS LAFGFGVVPL ALGTGAGAGG RNAIGTAVLG GTVASTVLGI FMVPVFFLLI RSWFKSRSRQ EDAAQPAPIH PESAA
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