Gene Dtpsy_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2325 
Symbol 
ID7383185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2472303 
End bp2473643 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content73% 
IMG OID643655633 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002553762 
Protein GI222111498 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.116121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCACG CGACGACACC CGCGCCCATT GAGCGCCCCG CCCGCGCCCC CCGTCTTTCC 
GCTTCACCCG CTTTCTCCCC CTCGTGCACC ACTGCGGCCC GTCACGGCGC GCTCGCGCTG
CGGCTGGCTG GCCTGGCCCT GGCGCTGGGC CTGGCGGCCT GTGGCGGCAA GGACGCGCCA
GCCACCGAGC CACAGGGCCC CGCCGCCGTG GGCGTGGTCA CCCTGCAAAC GCGCGCGCAG
CAACTGGACG CCACCTTGCC CGGCCGCACC CGTGCCTACC TGACCGCCGA AGTGCGCCCC
CAGGTCTCGG GCATCGTGCA GCAGCGTCTG TTCACCGAGG GTGCGCTGGT GCGCAAGGGC
CAGCCGCTGT ACCAGATCGA CGACCGCCCG CTGCGCGCCA CCGAGGCCAG CGCCGAGGCC
ACCCTGGCCC GCGCCGAGGC CACGGCGCGC ACGCAGGAGG CCAATGCGCG CCGCAATGCC
GAACTGGTCA AGATCGACGC CATCAGCCGC CAGGCCTATG ACGAGAGCCA GGCCGCAGCC
GCGCAGGCCC GCGCCGACGT GGGCGTGGCC CGCGCCAACC TGGAGACGGC GCGCATCAAC
CTGCGCTACA GCCGCATCGA GGCGCCCATC GCCGGACGCA TCAGCCTGTC CAGCGTCACC
CCTGGCGCGC TGGTGACGGC CAACCAGGCC AATGCGCTCA CCACCATCGT GCAGATGGAC
CCGATGTACG TGGACTTCAC CCAGTCCAGC ACCGAGCTGG TGCAGCTCAA GCGCGACTGG
GAGGCCGGCC GCTACCAGAA GGTGGACGGC AACCAGATGC GCGTGCGCAT CCGGCTGGAC
GACGGCAGCG ACTACCCGCA CGAAGGCCGG CTGCAGTTTG CGGGCGTGAT CGTCAACGAC
ACCACGGGCA CGGTGACGCT GCGCGCCGTG GTGCCCAACC CCGACGGCGT GCTCATGCCC
GGCATGTACG TGCAGGCGCT GCTGCCCACG GGCCTGGCCA GCGACGCGCT GCTGATCCCG
CAGCAGTCCG TGAACCGCGA CCTGACGGGC CGCGCCAGCG TGCTGGTGGT CAACGCCGAC
AACGTGGTCG AGAAACGCCC CGTGGAACTG GCGCGCGCCC TGGGCAACCG CTGGCTGGTG
GACAGCGGCC TGCAACCCGG CGAGCGCCTG GTGGTGGATG GCTTTCAACG CATCAAGCCC
GGCGACAAGG TGGCGCCCCA GGTGGTGGAC CTGAACACCA AGAAGGGCCC GGCCGCCGCG
GCGCCAGCAC CCGCCGCCAG CGCCCCCCCC GCGGCGGGCC AGAGCGTGGA CATCACCGCC
CGCCCCGGCG CATCCCGCTG A
 
Protein sequence
MIHATTPAPI ERPARAPRLS ASPAFSPSCT TAARHGALAL RLAGLALALG LAACGGKDAP 
ATEPQGPAAV GVVTLQTRAQ QLDATLPGRT RAYLTAEVRP QVSGIVQQRL FTEGALVRKG
QPLYQIDDRP LRATEASAEA TLARAEATAR TQEANARRNA ELVKIDAISR QAYDESQAAA
AQARADVGVA RANLETARIN LRYSRIEAPI AGRISLSSVT PGALVTANQA NALTTIVQMD
PMYVDFTQSS TELVQLKRDW EAGRYQKVDG NQMRVRIRLD DGSDYPHEGR LQFAGVIVND
TTGTVTLRAV VPNPDGVLMP GMYVQALLPT GLASDALLIP QQSVNRDLTG RASVLVVNAD
NVVEKRPVEL ARALGNRWLV DSGLQPGERL VVDGFQRIKP GDKVAPQVVD LNTKKGPAAA
APAPAASAPP AAGQSVDITA RPGASR