Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2325 |
Symbol | |
ID | 7383185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2472303 |
End bp | 2473643 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643655633 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002553762 |
Protein GI | 222111498 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.116121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCACG CGACGACACC CGCGCCCATT GAGCGCCCCG CCCGCGCCCC CCGTCTTTCC GCTTCACCCG CTTTCTCCCC CTCGTGCACC ACTGCGGCCC GTCACGGCGC GCTCGCGCTG CGGCTGGCTG GCCTGGCCCT GGCGCTGGGC CTGGCGGCCT GTGGCGGCAA GGACGCGCCA GCCACCGAGC CACAGGGCCC CGCCGCCGTG GGCGTGGTCA CCCTGCAAAC GCGCGCGCAG CAACTGGACG CCACCTTGCC CGGCCGCACC CGTGCCTACC TGACCGCCGA AGTGCGCCCC CAGGTCTCGG GCATCGTGCA GCAGCGTCTG TTCACCGAGG GTGCGCTGGT GCGCAAGGGC CAGCCGCTGT ACCAGATCGA CGACCGCCCG CTGCGCGCCA CCGAGGCCAG CGCCGAGGCC ACCCTGGCCC GCGCCGAGGC CACGGCGCGC ACGCAGGAGG CCAATGCGCG CCGCAATGCC GAACTGGTCA AGATCGACGC CATCAGCCGC CAGGCCTATG ACGAGAGCCA GGCCGCAGCC GCGCAGGCCC GCGCCGACGT GGGCGTGGCC CGCGCCAACC TGGAGACGGC GCGCATCAAC CTGCGCTACA GCCGCATCGA GGCGCCCATC GCCGGACGCA TCAGCCTGTC CAGCGTCACC CCTGGCGCGC TGGTGACGGC CAACCAGGCC AATGCGCTCA CCACCATCGT GCAGATGGAC CCGATGTACG TGGACTTCAC CCAGTCCAGC ACCGAGCTGG TGCAGCTCAA GCGCGACTGG GAGGCCGGCC GCTACCAGAA GGTGGACGGC AACCAGATGC GCGTGCGCAT CCGGCTGGAC GACGGCAGCG ACTACCCGCA CGAAGGCCGG CTGCAGTTTG CGGGCGTGAT CGTCAACGAC ACCACGGGCA CGGTGACGCT GCGCGCCGTG GTGCCCAACC CCGACGGCGT GCTCATGCCC GGCATGTACG TGCAGGCGCT GCTGCCCACG GGCCTGGCCA GCGACGCGCT GCTGATCCCG CAGCAGTCCG TGAACCGCGA CCTGACGGGC CGCGCCAGCG TGCTGGTGGT CAACGCCGAC AACGTGGTCG AGAAACGCCC CGTGGAACTG GCGCGCGCCC TGGGCAACCG CTGGCTGGTG GACAGCGGCC TGCAACCCGG CGAGCGCCTG GTGGTGGATG GCTTTCAACG CATCAAGCCC GGCGACAAGG TGGCGCCCCA GGTGGTGGAC CTGAACACCA AGAAGGGCCC GGCCGCCGCG GCGCCAGCAC CCGCCGCCAG CGCCCCCCCC GCGGCGGGCC AGAGCGTGGA CATCACCGCC CGCCCCGGCG CATCCCGCTG A
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Protein sequence | MIHATTPAPI ERPARAPRLS ASPAFSPSCT TAARHGALAL RLAGLALALG LAACGGKDAP ATEPQGPAAV GVVTLQTRAQ QLDATLPGRT RAYLTAEVRP QVSGIVQQRL FTEGALVRKG QPLYQIDDRP LRATEASAEA TLARAEATAR TQEANARRNA ELVKIDAISR QAYDESQAAA AQARADVGVA RANLETARIN LRYSRIEAPI AGRISLSSVT PGALVTANQA NALTTIVQMD PMYVDFTQSS TELVQLKRDW EAGRYQKVDG NQMRVRIRLD DGSDYPHEGR LQFAGVIVND TTGTVTLRAV VPNPDGVLMP GMYVQALLPT GLASDALLIP QQSVNRDLTG RASVLVVNAD NVVEKRPVEL ARALGNRWLV DSGLQPGERL VVDGFQRIKP GDKVAPQVVD LNTKKGPAAA APAPAASAPP AAGQSVDITA RPGASR
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