Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2306 |
Symbol | |
ID | 7384899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2451216 |
End bp | 2452289 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643655615 |
Product | lytic murein transglycosylase B |
Protein accession | YP_002553744 |
Protein GI | 222111480 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.450131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCA CCCTTGCAAA AGCTACATTT TTCATAGCTG TCAGCGCTTT ACCCATAAGC GCTTTAGCCC AAAATCATTC TAAAAAGACA GCCACCAAGA CCGCGGCCAC CTACCACTAT GCGCAACGTG CGCAGGCCAT GCAGTTCGCA GACGATCTGG CAGAGCGGCG CGGGCTGGAC CGCGAATGGG TGCGCCAGGC GATCGGGCAA GCGCGGCTGC TGCCCCAGGT GCCGCGCCTG GTGCTGCCGC CCGCGCGGGG TACGCCCAAG AACTGGGCGG CCTACCGTGC GCGCTTCGTG GAGCCCACGC GCATCCGCGC GGGCCTGCGC TTCTGGCAGG ACAACGCCGA AGCGCTGGCA CGCGCTGAAA CGCAATACGG CGTGCCCGCC GAGATCATCG TGGGCATCAT CGGCGTGGAG ACACTCTACG GCCAGCACAT GGGCAACCTG CGGGTGATCG ACGCGCTGGC CACGCTGGCC TTCGACTTTC CCGACGCACA CCCGCGCGCG GCCGAGCGGC GCGCGTTCTT CCAGCGCGAG CTGGAGCAGT TTCTGACCCT CATGGACCGC ACGGGCATCG ACCCGCACAC CCCGCGCGGC AGCTACGCGG GCGCCATGGG TCTGGGGCAG TTCATGCCGT CGAGCTGGTC GCGCTACGCG GTGGATTTCG ACGGCGACGG CCGCATCGAC CTGTGGCGCA GCGCGCAGGA CGCCATCGGC TCCGTGGCCA ACTACTTCGT GGGCCACGGC TGGCAGAGCG GCATGCCCAC GCACTACGCA GTGGCGTTCG ACGCGGCCAC GCTGCAGTTG GACGCGCTGC TGGCGCCGGA CATCCTGCCC ACTTTCAGCG TCGCCAGCAT GGCGGCCCAA GGGGCGCACG TGCAGAGCGA AGGCGCGCAG CACACGGGTC CATTAGCGCT GGTGGAACTG CAGAATGGCG CTGAGGCGCC CAGCTACGTG GCCGGCACCG AGAACTTCTA TGCGATCACG CGCTACAACT GGTCGAGCTA CTACGCCATG GCGGTGATTG AGCTGGGCCG TGAAATCGCA ACGGCGCGTG CCACGCCACG GTAG
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Protein sequence | MIRTLAKATF FIAVSALPIS ALAQNHSKKT ATKTAATYHY AQRAQAMQFA DDLAERRGLD REWVRQAIGQ ARLLPQVPRL VLPPARGTPK NWAAYRARFV EPTRIRAGLR FWQDNAEALA RAETQYGVPA EIIVGIIGVE TLYGQHMGNL RVIDALATLA FDFPDAHPRA AERRAFFQRE LEQFLTLMDR TGIDPHTPRG SYAGAMGLGQ FMPSSWSRYA VDFDGDGRID LWRSAQDAIG SVANYFVGHG WQSGMPTHYA VAFDAATLQL DALLAPDILP TFSVASMAAQ GAHVQSEGAQ HTGPLALVEL QNGAEAPSYV AGTENFYAIT RYNWSSYYAM AVIELGREIA TARATPR
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