| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2277 |
|---|
| Symbol | |
|---|
| ID | 7384870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2420314 |
|---|
| End bp | 2422905 |
|---|
| Gene Length | 2592 bp |
|---|
| Protein Length | 863 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643655586 |
|---|
| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
|---|
| Protein accession | YP_002553715 |
|---|
| Protein GI | 222111451 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1049] Aconitase B |
|---|
| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAG CCTACCGCGA CCATGTGGCC GAGCGCGCTG CATTGGGCAT CCCGCCGCTG
CCGCTCGATG CCAAGCAGAC GGCCGAACTG ATCGAGCTGA TCAAGAACCC GCCCGCTGGC
GAGGAGGCTT TCCTGGTGGA CCTGCTGACC CACCGCGTGC CGCCGGGGGT GGACGACGCA
GCCAAGGTCA AGGCGTCCTT CCTCGCGGCC GTCGCCCATG GCGACATCAC GGTCGGCCTG
ATTTCCAAGG CCAAGGCCAC CGAGCTGCTG GGCACCATGG TGGGTGGCTA CAACGTGCAC
CCGCTGATCG AGCTGCTGGA CGACGCCGAA GTCGCTTCCG TGGCTGCCGA AGCGCTGAAG
AAGACGCTGC TGATGTTCGA CTTCTTCAAC GACGTGGCCG CCAAGGCCAA GGCCGGCAAC
GCCAAGGCCC AGGAGGTCAT GCAGAGCTGG GCCAATGCCG AGTGGTTCAC CAGCCGCCCC
AAGGTCGAGC AAAAGATCAC CGTCACCGTG TTCAAGGTGC CCGGCGAGAC CAACACCGAC
GACCTGTCGC CCGCGCCTGA CGCCTGGAGC CGCCCCGACA TCCCGCTGCA CTACCTGGCG
ATGCTGAAGA ACACGCGCCC CGACGCAGCC TTCAAGCCCG AGGAAGACGG CAAGCGCGGC
CCGATGCAGT TCATCGAGGA CCTGAAGAAG AAGGGCCATC TGGTCGCCTA CGTGGGTGAC
GTGGTGGGTA CCGGCTCGTC GCGCAAGTCC GCCACCAACT CCATCATCTG GGGCACGGGC
GTGGACATTC CCTTCGTGCC CAACAAGCGC TTTGGTGGCG TGACGCTGGG CGGCAAGATC
GCTCCCATCT TCTTCAACAC GCAGGAAGAC TCCGGCGCTC TGCCGATCGA AGTGGACGTT
TCCAAGCTGG AGATGGGCGA CGTGATCGAT GTGCTGCCCT ACGACGGCAA GATCGTGAAG
AACGGCGAGA CCGTGGCCGA GTTTGCGCTC AAGTCCGACG TGTTGCTGGA CGAAGTGCAG
GCCGGTGGCC GCATCAACCT GATCATCGGC CGCTCGCTCA CCGCCAAGGC GCGTGAGTTC
CTGGGCCTGC CCGCCTCGAC CGCGTTCCGC CTGCCCCAGG CACCTGCGGC GTCCAATGCT
GGTTTCACGC TGGCCCAGAA GATGGTCGGC CGCGCCTGCG GCCTGCCCGA AGGCCAGGGC
ATCCGCCCCG GCACCTACTG CGAACCCAAG ATGACCACCG TCGGCTCGCA GGACACCACG
GGCCCCATGA CGCGCGACGA GCTGAAGGAC CTGGCCTGCC TGGGCTTCTC GGCCGATCTG
GTGATGCAGT CCTTCTGCCA CACCGCTGCC TACCCCAAGC CCGTGGACGT GAAGACGCAC
CGCGAACTGC CGGCCTTCAT CAGCAACCGC GGCGGCGTGG CTCTGCGCCC CGGCGACGGC
GTGATCCACA GCTGGCTCAA CCGCCTGCTG CTGCCTGACA CCGTGGGCAC CGGCGGTGAC
TCGCACACCC GCTTCCCCAT CGGCATTTCC TTCCCCGCAG GCTCGGGCCT CGTGGCTTTC
GGCGCCGCCA CCGGCGTGAT GCCGCTGGAC ATGCCCGAGT CGGTGCTGGT GCGCTTCAAG
GGCGAGATGC AGCCCGGCGT GACGCTGCGC GACCTGGTGC ACGCGATCCC GCTGTACGCC
ATCAAGGCGG GCCTGCTGAC CGTGGCCAAG GCCGGCAAGA AGAACATCTT CTCGGGCAAG
ATCCTCGAAA TCGAGGGCCT GCCGGACCTG AAGGTGGAGC AAGCCTTCGA GCTGTCCGAC
GCCTCGGCCG AGCGTTCCGC CGCCGGCTGC ACGATCAAGC TCAACCCCGA GCCGATCAAG
GAGTACCTGC GCTCCAACAT CGTGCTGATG AAGAACATGA TCGCCGATGG TTACCAGGAC
GCGAAGACGC TGCAGCGCCG CATCGAGAAG GTGGAAGCCT GGCTCGCCAA GCCCGACCTG
CTCGAAGCCG ACAAGGACGC CGAATACGCC GCCGTGATCG AGATCGACCT GGCCGACATC
AAGGAGCCCA TCGTCTGCTG CCCGAACGAT CCGGACGATG CCAAGTTCCT GTCCGAAGTG
GCCGGCACCA AGATCGACGA GGCCTTCATC GGCTCGTGCA TGACCAACAT CGGCCACTTC
CGCGCAGCGG CCAAGCTGCT GGGCGGCCAG CGCGACATTC CCGTCAAGCT GTGGGTGGCA
CCGCCCACCA AGATGGACCA GAACGAGCTG ATCAAGGAAG GCCACTACGC TGCCTTCGGC
ACGGCCGGCG CGCGCACCGA AATGCCCGGC TGCTCGCTGT GCATGGGCAA CCAGGCGCAG
GTGCGTGAAG GTGCGACGGT GATTTCTACC TCCACCCGCA ACTTCCCCAA CCGCCTGGGC
AAGAACACCA ACGTGTTCCT GGGTTCGGCC GAGCTGGCCG CCATCGCCTC GCGCCTGGGC
AAGCTGCCCA CCAAGGAGGA ATACCTCCAG GAAATGGGCG TGATCGATGC CGACAAGGCC
AGCGTGTACC GCTACATGAA CTTCGACCAG ATCGAGGAAT ATGCAGAGGT CGCCAAGGGC
GTGACGGCCT GA
|
|---|
| Protein sequence | MLKAYRDHVA ERAALGIPPL PLDAKQTAEL IELIKNPPAG EEAFLVDLLT HRVPPGVDDA
AKVKASFLAA VAHGDITVGL ISKAKATELL GTMVGGYNVH PLIELLDDAE VASVAAEALK
KTLLMFDFFN DVAAKAKAGN AKAQEVMQSW ANAEWFTSRP KVEQKITVTV FKVPGETNTD
DLSPAPDAWS RPDIPLHYLA MLKNTRPDAA FKPEEDGKRG PMQFIEDLKK KGHLVAYVGD
VVGTGSSRKS ATNSIIWGTG VDIPFVPNKR FGGVTLGGKI APIFFNTQED SGALPIEVDV
SKLEMGDVID VLPYDGKIVK NGETVAEFAL KSDVLLDEVQ AGGRINLIIG RSLTAKAREF
LGLPASTAFR LPQAPAASNA GFTLAQKMVG RACGLPEGQG IRPGTYCEPK MTTVGSQDTT
GPMTRDELKD LACLGFSADL VMQSFCHTAA YPKPVDVKTH RELPAFISNR GGVALRPGDG
VIHSWLNRLL LPDTVGTGGD SHTRFPIGIS FPAGSGLVAF GAATGVMPLD MPESVLVRFK
GEMQPGVTLR DLVHAIPLYA IKAGLLTVAK AGKKNIFSGK ILEIEGLPDL KVEQAFELSD
ASAERSAAGC TIKLNPEPIK EYLRSNIVLM KNMIADGYQD AKTLQRRIEK VEAWLAKPDL
LEADKDAEYA AVIEIDLADI KEPIVCCPND PDDAKFLSEV AGTKIDEAFI GSCMTNIGHF
RAAAKLLGGQ RDIPVKLWVA PPTKMDQNEL IKEGHYAAFG TAGARTEMPG CSLCMGNQAQ
VREGATVIST STRNFPNRLG KNTNVFLGSA ELAAIASRLG KLPTKEEYLQ EMGVIDADKA
SVYRYMNFDQ IEEYAEVAKG VTA
|
|---|
| |