| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2201 |
|---|
| Symbol | |
|---|
| ID | 7384506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2340608 |
|---|
| End bp | 2341291 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643655505 |
|---|
| Product | two component heavy metal response transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002553641 |
|---|
| Protein GI | 222111377 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATAT TGATCGTCGA GGACGAGCCC AAGACCGGGG CCTACCTGCG CCAGGGGTTG
AGCGAGGCGG GCTACAGCTG CGACCTGGTG CCCAATGGCG GGGATGGACT GCACATGGCC
ATCCATGGCC AGTACGACTT GGTGATTCTG GATGTCATGC TGCCGGGCCT GAACGGCTGG
CAGGTGCTGC AGTCCCTGCG TGACCGGGGC CTGGAAATGC CCGTGCTGTT CCTGACCGCC
CGCGACCAGG TAGAGGACCG TGTCAAGGGC CTGGAGCTGG GGGCCGATGA CTATCTGGTC
AAGCCGTTTT CGTTTGCCGA ACTGCTGGCC AGGGTGCGCA TCATTCTGCG GCGCGGCCAT
GCCGGCAGCG AAGGCACGAC ACTGCGCGTA GCCGATCTGG AGCTCGATCT GCTGCGCCGC
CGGGTGTCCC GCAATGGCCG GCGCGTGGAC CTGACGGCCA AGGAATTTGG CCTGCTGGAG
CTGCTGATGC GCCGCCATGG CGAGGTGTTG CCGCGCTCGC TCATCGCATC GCAGGTATGG
GACATGAACT TCGACAGCGA CACCAACGTC ATCGAAGTCG CCATGCGCCG CCTGCGCGTG
AAGATTGATG AAGGCCATCC GGTCAAGCTC ATCCAGACCG TGCGCGGCAT GGGCTATGTG
CTGGATCTGC CCGAGGAGGC CTGA
|
|---|
| Protein sequence | MKILIVEDEP KTGAYLRQGL SEAGYSCDLV PNGGDGLHMA IHGQYDLVIL DVMLPGLNGW
QVLQSLRDRG LEMPVLFLTA RDQVEDRVKG LELGADDYLV KPFSFAELLA RVRIILRRGH
AGSEGTTLRV ADLELDLLRR RVSRNGRRVD LTAKEFGLLE LLMRRHGEVL PRSLIASQVW
DMNFDSDTNV IEVAMRRLRV KIDEGHPVKL IQTVRGMGYV LDLPEEA
|
|---|
| |