Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2187 |
Symbol | |
ID | 7384492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2326966 |
End bp | 2328246 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643655491 |
Product | membrane protein-like protein |
Protein accession | YP_002553627 |
Protein GI | 222111363 |
COG category | [S] Function unknown |
COG ID | [COG3174] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.946223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGTT ACGAACTACC ACCGGGCGCC CCGGGCTTGG TTGCCGCGCT TGCTGTCGGT CTGGTGATTG GCCTGGAACG CGGCTGGCAC GAGCGCGAAT TGCCAGAGGG AGGGCGTGTT GCAGGTTTAC GCACCTTTGC ACTGACCGGA CTGCTCGGCG GTGTGCTGGG GCATCTGCAG CCTGTTTTCG GCGCTTGGCC TTTGCTGGGT GCGCTGCTCG GACTCTCCTT GCTGCTGACG GTGTCCTACG CCCGAAATGC CAAACTGACG GGCAACCTGA GCGCGACTAC CCCGGTGGCG ATGCTCCTTA CTTTGGCCCT GGGCGCCTTT GCGGCACACG GCAACATCAC CTTGGCATTG TCGGCAGCGG TGGTGAGTGC TGTGTTGCTG GACCTCAAGC CGACCCTGCA CGGTTGGTTG CGCTGGATCG ATCACCGCGA GTTGACTGCA TCGTTGCAGT TGCTGGTGTT GTCCACGGTC ATCCTGCCCT ACCTGCCGAA CACGGGTCTG GGACCCTATG CCGCGCTCAA TCCGTACCAG CTTTGGTGGG CCGTCATCCT GATTGCAGGC CTGTCGCTGA CGGGGCACTT CGCCATGCGG ATCACCGGTG CGCAAAGGGG TGTGCTGTGG ACCGGGATTC TGGGAGGGCT GGCCTCTTCC ACGGCTGCCA CGATGGCTTT GGCCCGCTAT GCCCGTGCGC AGCCTTCGCT GGCCGGCGCG GCGGCGGCCG GCACGTTGGC CTCGTGTGGC GTCATGTTTT TTCGCATGGT CATTCTGCTG GGCGTCATCC AGCCGAAGCT GGTGTCCAGC TTCGGCAGCG CCCTGGTAGT CACTGGCGTG GTTTTGCTGT GTATTGCGCT ATGGCGGTGG CGCAAAGTGG ATCGCACTGC AGTGGAGGAG GGCGCTGTCG GCGCGATGGC GCCATTCGAC CTTGGCACCG CGCTCGGTTT TGGTGTGCTG CTCGCTGTCA TGAGTGTCCT GGTGCCTGCG GCAAAGCAGT GGCTGGATAC CAGCGGCCTC TATGTTTTGT CGGCGGTGTC GGGCCTGGCG GACGTGGATG CGATCTTGAT CTCGCTTGCT CGGCTGTATG GCTCTGGAGG ATTGTCAACG GTGGCCACTG TCACGGCGCT CGGTCTTGCG ACGTTGGCAA ACATGTTGAC CAAGGCCGGC ATCGCCTGGA CGACTGGTGG GACGCAGGTC GGTAAGTCCG TGGTGTCCGG ATACCTGGTC GCGATGGCTT GCGGAGCGAT CGTCTTGGCG CTGAGCCTGA CGCTTTCGTG A
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Protein sequence | MNSYELPPGA PGLVAALAVG LVIGLERGWH ERELPEGGRV AGLRTFALTG LLGGVLGHLQ PVFGAWPLLG ALLGLSLLLT VSYARNAKLT GNLSATTPVA MLLTLALGAF AAHGNITLAL SAAVVSAVLL DLKPTLHGWL RWIDHRELTA SLQLLVLSTV ILPYLPNTGL GPYAALNPYQ LWWAVILIAG LSLTGHFAMR ITGAQRGVLW TGILGGLASS TAATMALARY ARAQPSLAGA AAAGTLASCG VMFFRMVILL GVIQPKLVSS FGSALVVTGV VLLCIALWRW RKVDRTAVEE GAVGAMAPFD LGTALGFGVL LAVMSVLVPA AKQWLDTSGL YVLSAVSGLA DVDAILISLA RLYGSGGLST VATVTALGLA TLANMLTKAG IAWTTGGTQV GKSVVSGYLV AMACGAIVLA LSLTLS
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