| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2183 |
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| Symbol | |
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| ID | 7384488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2320634 |
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| End bp | 2323765 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643655487 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_002553623 |
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| Protein GI | 222111359 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.505184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCGA AGATCATTGA CTGGTCGGGG AACAACCGTT TTCTGGTTCT GCTTGCTACG
CTTTTTGTCA TTGCCGGGGG GGTGTTCGCG GTACTGCGAA CACCGCTGGA CGCGCTGCCG
GACTTGTCCG ACGTGCAGGT CATCGTCTAC ACCGAATACC CTGGACAAGC GCCCCAGGTG
GTCGAGGACC AGGTCACCTA TCCGTTGACC ACATCCATGC TGTCGGTGCC CAAGTCCAAA
GTGGTGCGAG GTTTTTCGTA CTTTGGAGCG TCCTTCGTTT ACATCATCTT TGAGGATGGC
ACAGACATCT ATTGGGCACG TTCGCGCGTG CTGGAATACC TCAACTTCGC TTCCAGCCGA
ATGCCCAAGG GTGTCACGCC GCAAATCGGC CCTGACGCCA CCGGCGTGGG TTGGGTCTAC
CAGTACGCGT TGCTTGCCAA GGACAAGACG CTGGCCGAGT TGCGCACATT GCAGGATTGG
TATCTGCGCT ATCAGTTGAC CAAGGCACAT GGCGTGGCCG AGGTGGCATC CATTGGTGGC
TTTGTCCAAA CCTACCAGGT CACCGTCGAT CCGGTAAAAC TGCGGGCCTA CGGCATTCCG
TTGGCCAAGG TGTCGCAGGT TATTCGCGAT TCCAATCGTG ACGTCGGAGG CCGCGTCGTG
GAGATGGCCG AGACGGAATA CATGGTGCGC GGCAAAGGCT ATTTGCGCGG TGTTGCGGAC
ATTGAAAATC TGGTCGTCAA GGCCGAGAAG GGCACGCCCG TATTGATTCG AGATATTGCC
CGCGTCGAAA TCGCTCCCGA CGAAAGGCGT GGTCTTACCG AGCTCAATGG GGAGGGCGAG
GTGGTCTCGG GCATCGCCAT GGCCCGCTAT GGCCAGAACG CCCTGGAGGT CATCCATAAC
CTGAAGGAGA AGATCGCCGA GGTTTCGACC GGCCTGCCCG AGGGCGTGAC CATCGAGGCG
GTGTACGACC GCTCCGACCT GATTCATCGA GCCATCGATA CGCTCAAGCG CACGCTGCTG
GAGGAAAGCG TGATCGTTGC CTTGGTCTGC ATGGTCTTTC TGATGCACAT GCGATCAGCC
CTCGTGGCTA TCTTGATGTT GCCCGTGGGG GTGCTGATCT CCTTCATCGC GATGCGCATG
CTGGGCATGA ATTCCAACCT GATGAGTCTG GGTGGTATCG CCATTGCGAT CGGGGCCATG
GTAGATGCGG CCATCGTCAT GATCGAGAAC GCCCATAAGC ACTTGGAGAG ACTCCCGCCC
GAGCACGACG GCAAGCAGCG AGCGCAAGCC ATGCTCACGG CCTGCAAGGA GGTCGGCCCG
GCACTGTTCT TCTCGCTGCT CATCATCACC GTGTCGTTTC TGCCCGTGTT CACGCTGGAA
TCACAGGAAG GACGCATGTT CTCGCCGCTG GCCTTCACCA AGACCTTCTC GATGGCGGGC
GCGGCACTGC TGTCGGTGAC GCTGGTGCCG GTGCTCATGA TGATTTTCAT TCGCGGGCGC
ATCATGCCGG AGTCACGTAA CCCGGTGAAC CGGTTCCTGA TCTGGGCCTA CCGGCCCATC
ATTGCCGCTG TGATGCGCTG GAAGAAAGTG ACCATTGCTA TTGCCCTGAT CGTGCTTGGG
GTGTCGTTCT ATCCGGCCAG CAAGCTAGGG TCGGAGTTCA TGCCGACACT CAATGAAGGC
ACCTTGCTCT ACATGCCCGC TTCGCTGCCC GGCATGTCGA TCACCAAAGC CGCCGAGTTG
CTGCAGACGC AAAACAAGAT CATCAAGAGC TTTCCGGAGG TGGAATCGGT CTACGGCAAG
GCAGGGCGAG CCAACACGGC CACCGACCCC GCACCGACGG AAATGTTCGA GACGGTCATC
AATCTCAAGC CTGAGTCAGC GTGGCGATCT GGCATGACCA CCGACAAATT GATTGCCGAG
ATGGACAAGG CACTGCAATT TCCGGGAGTC TCCAATGCCT GGACCATGCC CATCAAGGCG
CGCATCGACA TGCTGTCCAC CGGCATCCGC ACGCCCATTG GAATCAAGGT TTTTGGCAAG
GACCTGGACG AGATGGAACG CCTGGCGCGG GAGATCGAGA CCGTGGTGAA AGCGGTTCCA
GGCACGACCT CGGCATTCGC GGAGCGGATC ACAGGCGGTT TCTACCTCAA CATCGAGCCT
GACCGCACTC AGTTGGCACG CTACGGTCTG GCGGTGGGCG ATCTGCAGGA CGTCATCGGT
ACGGCGCTTG GCGGGGACAT GGTGACCACC ACGGTCGAGG GGCGAGAGCG TTTTGGCGTG
ACGGTTCGCT ACCCACGCGA GCTGCGGTCT GATCCCCAGC AGATCGCTCG CGAGGTCCTG
GTGCCGACCA TGGATGGAGC CATGGTGCCG CTGGGCCAGG TCGCGCGCGT GGAGGTGGCC
AAGGGCGCAC CGGGCATCCG TACCGAAAAT GGATTGCTGT CAGCCTACAT CTTTGTGGAC
ATCCGAGATC GTGACATCGG AGGCTACGTC GCCGAGGCGC GCAAAGCAGT GAACGAGCAG
GTCAAATTCC CGCCAGGCTA CTACGCCACA TGGAGTGGTC AGTTTGAATC CATGGAACGA
GCTATCGAGA AGATGAAACT CGTTGTGCCG GTAACGTTGT TGCTCATCTT CTTGCTGCTG
TACCTGAATT TCCGGCGCCT GACGGAGACA CTGATCGTCA TGCTGTCGGT GCCGTTCGCG
CTGGTCGGCG GAGTCTGGCT GATGTGGTGG CTTGGCTACA ACCTCTCCGT CGCGGTTGCG
GTGGGCTTCA TCGCCCTGGC CGGGGTGGCC GCTGAAACCG GGGTCGTCAT GCTGATCTAC
CTGGACCACG CCTGGGAAGA GATCAAGGAG AAACGCCGCA CTGAGGGGAA AGAGCCAGGA
GTTGCTGACC TTTATGAGGC AGTCATGGAG GGCGCCGTCG AACGGGTTCG TCCCAAGATG
ATGACGGTCG TTGCCATCAT GGCGGGCCTG CTGCCCATCA TGTGGGGGAC CGGCACCGGC
TCGGAAGTGA TGAGTCGCAT TGCCGCACCG ATGGTCGGTG GCATGATTTC CTCGACCGTA
CTGACACTGG CCGTGATCCC TGCGCTTTAC GCTCTCGTCA AGCAAGTTGA ACTTCGAAGA
AGGCGAGCTT GA
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| Protein sequence | MLAKIIDWSG NNRFLVLLAT LFVIAGGVFA VLRTPLDALP DLSDVQVIVY TEYPGQAPQV
VEDQVTYPLT TSMLSVPKSK VVRGFSYFGA SFVYIIFEDG TDIYWARSRV LEYLNFASSR
MPKGVTPQIG PDATGVGWVY QYALLAKDKT LAELRTLQDW YLRYQLTKAH GVAEVASIGG
FVQTYQVTVD PVKLRAYGIP LAKVSQVIRD SNRDVGGRVV EMAETEYMVR GKGYLRGVAD
IENLVVKAEK GTPVLIRDIA RVEIAPDERR GLTELNGEGE VVSGIAMARY GQNALEVIHN
LKEKIAEVST GLPEGVTIEA VYDRSDLIHR AIDTLKRTLL EESVIVALVC MVFLMHMRSA
LVAILMLPVG VLISFIAMRM LGMNSNLMSL GGIAIAIGAM VDAAIVMIEN AHKHLERLPP
EHDGKQRAQA MLTACKEVGP ALFFSLLIIT VSFLPVFTLE SQEGRMFSPL AFTKTFSMAG
AALLSVTLVP VLMMIFIRGR IMPESRNPVN RFLIWAYRPI IAAVMRWKKV TIAIALIVLG
VSFYPASKLG SEFMPTLNEG TLLYMPASLP GMSITKAAEL LQTQNKIIKS FPEVESVYGK
AGRANTATDP APTEMFETVI NLKPESAWRS GMTTDKLIAE MDKALQFPGV SNAWTMPIKA
RIDMLSTGIR TPIGIKVFGK DLDEMERLAR EIETVVKAVP GTTSAFAERI TGGFYLNIEP
DRTQLARYGL AVGDLQDVIG TALGGDMVTT TVEGRERFGV TVRYPRELRS DPQQIAREVL
VPTMDGAMVP LGQVARVEVA KGAPGIRTEN GLLSAYIFVD IRDRDIGGYV AEARKAVNEQ
VKFPPGYYAT WSGQFESMER AIEKMKLVVP VTLLLIFLLL YLNFRRLTET LIVMLSVPFA
LVGGVWLMWW LGYNLSVAVA VGFIALAGVA AETGVVMLIY LDHAWEEIKE KRRTEGKEPG
VADLYEAVME GAVERVRPKM MTVVAIMAGL LPIMWGTGTG SEVMSRIAAP MVGGMISSTV
LTLAVIPALY ALVKQVELRR RRA
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