| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2117 |
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| Symbol | |
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| ID | 7383052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2270980 |
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| End bp | 2272050 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643655436 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002553572 |
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| Protein GI | 222111308 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.27338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTGCTG CTCGCAACGG CACGCAGATC AACTATGAAG TGACGGTGAG CGCGGACCAC
CATGCCAAGA CGGCCATGGA ACTGCGCCAA CTGCTGAGCC ATGACAAGGG CATCAACGTT
AGTGCCGTTG GCGACAAGGT CGTGCTGGAC GGCATGTATG CGAACCAGGA CTCGGCCGCC
AAGATCCAGA AGATCGTCAA GGCTTATCCG CAGGTGCTCA ATCTGGTGCG CGAGCGGCCC
GAGGATCAGT TGGTGGTGCC CGAGCAGATG GTGCAGTTGG ACGTGAAGGT GGTCGAGGTG
CGCAAGCAGG CGCTCGACAA CATCGGCGTG AAGTGGAGCA ACCTGGGCGT GGCTGGCCCG
ACGTTTGCCA CGTCGGGATA CTTCTATGCC AACTCGGCCA ACTTCCGGGG ACTGAACCAG
GAGGGATACC CCATCACTAC GCCGGCGCGA CCCTTCATCT CCTATCTGGG GCTGGCCACG
CAGATCACTT CAGTACTGAA CTTCTTGGAG TCCAACGGAG ACAGTTGGAC GTTGGCAGAG
CCGCGCATCA GCAGTGTTAG CGGTGGATCG TCAAAGGTGC AGGTGGGTGG CGAGATACCC
ATCCCGGTAA GTTCCGGTTT CGGCCAACTG TCGGTGGTCT ACAAACCGTA TGGCGTGATT
TTGGAGTTCA AGCCGGTGAT CGACAAGGCG GGCAACGTGC GCTCGTCCAT CGTGGCGGAG
GTGAGCCAGC CGGATCGCAG TGCAGGGCAG GGGCAGTTCG TAGCGTTTAC TACCAACCGC
ACTGAGACCG AAGTCAGTCT GAAGCAAAAC GAAACGCTGG TGATTTCCGG CCTGCTCAAA
AGCGTGGGAG CGCGTAACAA GGAAGGCATT CCCGTCATCG GGCGTGCGCC GGTGCTGGGC
CGGCTGTTTT CCACGCAGGA GATGACCAAC GAACAGACAG AGATGCTCGT GGTCGTGACG
CCGCGCATCC ATACGCCGGC GGCAGACCGT GCCCAGGTGC TGGCGAGCGA GAACGCTTAC
CAGCGCTTGA ATGAAGTCAA GGACATGATC GAAAGCAAGC TGGCACGCTG A
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| Protein sequence | MAAARNGTQI NYEVTVSADH HAKTAMELRQ LLSHDKGINV SAVGDKVVLD GMYANQDSAA
KIQKIVKAYP QVLNLVRERP EDQLVVPEQM VQLDVKVVEV RKQALDNIGV KWSNLGVAGP
TFATSGYFYA NSANFRGLNQ EGYPITTPAR PFISYLGLAT QITSVLNFLE SNGDSWTLAE
PRISSVSGGS SKVQVGGEIP IPVSSGFGQL SVVYKPYGVI LEFKPVIDKA GNVRSSIVAE
VSQPDRSAGQ GQFVAFTTNR TETEVSLKQN ETLVISGLLK SVGARNKEGI PVIGRAPVLG
RLFSTQEMTN EQTEMLVVVT PRIHTPAADR AQVLASENAY QRLNEVKDMI ESKLAR
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