| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1981 |
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| Symbol | tolB |
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| ID | 7382100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2117171 |
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| End bp | 2118493 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643655299 |
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| Product | translocation protein TolB |
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| Protein accession | YP_002553437 |
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| Protein GI | 222111173 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATTG ACCGCATCCC CAATACCCTT TCCTTCCGCA CGGCTCTGCC GCAGCTTTCG
CGGCGCCACG CCGTTGCAGC CTTGGCTGCC AGCTCCTCCC TTTCAGCGCT TGCGCAGTTC
CGTGTGGAAA TCACGGGCGT AGGCCTGACG CAACTGCCCA TTGCGATTGC ACCGTTCCGT
GGCGAACCGC AGTCGCCGCA GAAAATATCC GCCATCGTCC AGGCTGACCT GGAGCGCAGC
GGGCGCTTTT TGGGTGTGGA TGCGTCGGGT GTCGCGCTGG ATGAATCGTC CCGTCCCGAT
CTGTCCCTGT GGCGTCAGCG CAAGGCCGAC GCACTCACCT CCGGCAGCAT CACGCGCTTG
GCCGACGGCC GTTTCGACGT GCGATTCCGC TTGTGGGACG TGGTCAAGGC GCAGGACCTG
GGCGGCCAGA GCTTCGTGGT CACGCAGGCC GACCTGCGTC TGGTGGCGCA CCGCATTGCC
GACTTCGTCT ACGAAAAACT CACCGGCGAG CGCGGTATTT TCTCCACCCG CATTGCGTAT
GTGACCAAAG CCGGCTCGCG CTACAGCCTC TGGGTGGCCG ATGCGGACGG CGAGAACGCG
CAGTCAGCGC TTTCCAGTCC TGAGCCGATC ATTTCTCCCG CATGGGCGCC CACCGGCACC
CAGCTGGCTT ACGTATCGTT CGAGTCGCGC AAGCCGGTGG TGTACGTGCA TGACGTGGCC
ACAGGCCGCC GCCGTTTGAT CGCCAATTTC CGTGGCTCCA ACAGTGCCCC TGCTTGGTCG
CCCGATGGCC GTACCTTGGC CGTGACCCTC AGCCGCGACG GGGGCTCGCA GCTCTACACC
ATCGACGCCA ACGGCGGTGA GCCGCGCCGC CTGATGCAAA GCAGCGGCAT CGACACGGAG
CCCGTGTTCT CCAGCGACGG CCGCAGCATC TACTTCGTGA GCGACCGTGG AGGTTCGCCC
CAGGTGTACC GCGTGGCAGC CAGCGGGGGA GGCGCGGAGC GCGTGACCTT CAACGGGTCC
TACAACATTT CACCCAGTAT CAGTCCCGAT GGTCAGTGGT TGGCCTACAT TTCCCGCGTG
GGCGGCGCCT ATAAGCTGCA CGTGATGGAT TTCAAGTCGG GCAGCGTGAC GGCGGTGACC
GACACCTCCG CCGATGAGAA TCCCAGCTTT GCTCCCAATA GCCGCCTGAT CGTCTACGCC
ACGCAGCAGC AGGGTCGCGA AGCCCTGATG ACCACCACGC TGGACGGCAA AATCAAGGCG
CGTCTGGCGG GGCAGGGTGG GGATATCCGC GAGCCCGACT GGGGCCCGTT CCAGAACAAA
TAA
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| Protein sequence | MTIDRIPNTL SFRTALPQLS RRHAVAALAA SSSLSALAQF RVEITGVGLT QLPIAIAPFR
GEPQSPQKIS AIVQADLERS GRFLGVDASG VALDESSRPD LSLWRQRKAD ALTSGSITRL
ADGRFDVRFR LWDVVKAQDL GGQSFVVTQA DLRLVAHRIA DFVYEKLTGE RGIFSTRIAY
VTKAGSRYSL WVADADGENA QSALSSPEPI ISPAWAPTGT QLAYVSFESR KPVVYVHDVA
TGRRRLIANF RGSNSAPAWS PDGRTLAVTL SRDGGSQLYT IDANGGEPRR LMQSSGIDTE
PVFSSDGRSI YFVSDRGGSP QVYRVAASGG GAERVTFNGS YNISPSISPD GQWLAYISRV
GGAYKLHVMD FKSGSVTAVT DTSADENPSF APNSRLIVYA TQQQGREALM TTTLDGKIKA
RLAGQGGDIR EPDWGPFQNK
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