| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1979 |
|---|
| Symbol | |
|---|
| ID | 7382098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2115804 |
|---|
| End bp | 2116589 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643655297 |
|---|
| Product | tol-pal system protein YbgF |
|---|
| Protein accession | YP_002553435 |
|---|
| Protein GI | 222111171 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG TGTCTTTGCT CCTGTGCCCG CGGGCACTGG GCGCGGCGGC GCTGGCCGCC
GCTGCCTGCT GGTCGACCCC CAGCTATGCA TTATTCGAGG ACAGCGAGGC GCGCCGTGCC
ATCCTTGAGA TGCGCCAGCG TGTCGATGCA TTGACGCAAG CCAGCCAGCG TGCGGGTGAA
CGGTCCGGTG ATGAGGTCTC GCAACTACGG CGCAGCCTGC TCGACCTACA GATGCAAATC
GAGGCATTGC GCACTGAACA GGCGACTCTG CGTGGTCAAA ACGAGCAGTT ATTGCGCGAT
GTCGCAGAGC TGCAGCGCCG TCAGAAGGAC ATGGCGCAGG GTGTCGATGA GCGTTTGCGC
CAATTTGAGC CCGCGACGGT GACGCTGGAC GGGCGCGAAT TCCGGGCTGA TCCTGCAGAG
AAGCGTGATT TCGAGGCGGC CTTGGCGCTC TTCCGTGCAG GTAAGTTCGG TGAAGCGTCC
AACGCTTTCA GCGGCTTCGT GCGCCAGTAT CCACAGTCCG GCTATGTGCC GTCTGCCCGG
TTTTGGCTGG GCAATGCACA GTACGCCACG CGTGATTACA AAGAGGCCAT TAACAACTTC
AAGGCTCTGT TGTCGGCGGC GCCAGACCAT GCGCGCGCTC CCGAGGCGGC CCTCTCGATT
GCCAATTGCC AGATCGAATT GAAAGATACG CGGGCTGCGC GCAAGACCCT GGAAGACTTG
CTGCGCGTTT ATCCGCAGTC GGAAGCAGCA GCCGCTGCGA AGGAACGACT GGCGCGCCTG
AAGTGA
|
|---|
| Protein sequence | MARVSLLLCP RALGAAALAA AACWSTPSYA LFEDSEARRA ILEMRQRVDA LTQASQRAGE
RSGDEVSQLR RSLLDLQMQI EALRTEQATL RGQNEQLLRD VAELQRRQKD MAQGVDERLR
QFEPATVTLD GREFRADPAE KRDFEAALAL FRAGKFGEAS NAFSGFVRQY PQSGYVPSAR
FWLGNAQYAT RDYKEAINNF KALLSAAPDH ARAPEAALSI ANCQIELKDT RAARKTLEDL
LRVYPQSEAA AAAKERLARL K
|
|---|
| |