Gene Dtpsy_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1904 
Symbol 
ID7382265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2033585 
End bp2035012 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content64% 
IMG OID643655221 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_002553361 
Protein GI222111097 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC AATTTGATGT CATCGTGATC GGCGCAGGCC CTGGCGGCTA CATCGCCGCC 
ATCCGCGCCG CCCAGTTGGG CATGAATGTG GCCTGTATCG ACGAGTGGAA GAACGCCGCT
GGCGGCGCTG CACCCGGCGG TACCTGCACC AACGTGGGCT GCATTCCCTC CAAGGCGCTG
CTGCAGTCGT CCGAGCATTT CGAACATGCC AACCTGCACT TTGCCGACCA CGGCATCACC
GCCACGGGCG TGAAGATGGA CGTGGCCAAG ATGATTGCCC GCAAGGACAA CGTCGTGAAG
CAGAACAACG ACGGCATCCT GTACCTGTTC AAGAAGAACA AGGTGACCTT CTTCCACGGC
CGCGGCTCCT TCGTGAAGGC GGTGGACGGC GGCTATGAAA TCAAGGTCAC CGGCAAGGCC
GAAGAAACGC TGACCGCCAA GCAGGTCATC GTGGCCACCG GATCCAACGC ACGTGCGCTG
CCCGGTGCGG CCTTCGACGA AGAGCAGATC CTGTCCAACG ACGGCGCGCT CGCCATCGGC
AGCGTGCCGA AGAAGCTGGG CGTGATCGGC TCCGGCGTGA TCGGCCTGGA AATGGGCAGC
GTGTGGCGCC GCCTGGGTGC CGACGTGACC ATTCTGGAAG GCTTGCCCAC GTTCCTGGGC
GCGGTGGACG AGCAGATCGC CAAGGAGGCC AAGAAGGCCT TCGACAAGCA AGGCCTGAAG
ATCGAGCTGG GCGTGAAGAT TGGCGAAGTC AAGGCTGGCA AAAAGGGCGT GAGCATCGCC
TACACCAACG CCAAGGGCGA GGCCCAGGCG TTGGAAGTGG ACAAGCTGAT CGTCTCCATC
GGTCGCGTGC CCAACACCAC CGGCCTGAAT GCCGAAGGGG TGGGCCTGAA GCTGGATGAG
CGCGGCGCCG TGGTGGTTGA TGGCGACTGC AAGACCAACC TGCCCGGCGT GTGGGCGGTG
GGCGACGTGG TGCGCGGCCC CATGCTGGCG CACAAGGCCG AGGAAGAGGG CGTGGCCGTG
GCCGAGCGCA TGGCTGGCCA GCACGGCCAT GTCAACTTCA ACACCATCCC CTGGGTCATC
TACACCAGCC CCGAGATCGC CTGGGTCGGA CGCACCGAGC AGCAGCTCAA GGCCGACGGC
GTGAAGTACA AGGCGGGCAC CTTCCCGTTC CTGGCCAATG GCCGCGCGCG CGCGCTGGGC
GACACCACCG GCATGGTGAA GTTCCTGGCC GACGCCGCCA CGGACGAAAT CCTGGGCGTG
CACATCGTCG GTCCGATGGC TTCCGAACTG ATCGCCGAAG CCGTGGTCGC CATGGAGTTC
AAGGCATCGA GCGAAGACAT TGCGCGCATC TGCCATGCCC ACCCTTCGCT GTCCGAAGCC
ACCAAGGAAG CGGCGCTGGC CGTGGACAAG CGCACCCTCA ATTTCTGA
 
Protein sequence
MSKQFDVIVI GAGPGGYIAA IRAAQLGMNV ACIDEWKNAA GGAAPGGTCT NVGCIPSKAL 
LQSSEHFEHA NLHFADHGIT ATGVKMDVAK MIARKDNVVK QNNDGILYLF KKNKVTFFHG
RGSFVKAVDG GYEIKVTGKA EETLTAKQVI VATGSNARAL PGAAFDEEQI LSNDGALAIG
SVPKKLGVIG SGVIGLEMGS VWRRLGADVT ILEGLPTFLG AVDEQIAKEA KKAFDKQGLK
IELGVKIGEV KAGKKGVSIA YTNAKGEAQA LEVDKLIVSI GRVPNTTGLN AEGVGLKLDE
RGAVVVDGDC KTNLPGVWAV GDVVRGPMLA HKAEEEGVAV AERMAGQHGH VNFNTIPWVI
YTSPEIAWVG RTEQQLKADG VKYKAGTFPF LANGRARALG DTTGMVKFLA DAATDEILGV
HIVGPMASEL IAEAVVAMEF KASSEDIARI CHAHPSLSEA TKEAALAVDK RTLNF