Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1898 |
Symbol | |
ID | 7382259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2024183 |
End bp | 2027722 |
Gene Length | 3540 bp |
Protein Length | 1179 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643655215 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_002553355 |
Protein GI | 222111091 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGTCC ACTTGCGCTT GCACACTGAA TTTTCCGTCG TGGACGGAAC CACCCGTATC GACGAGGTCG TCAAGGCGGC GGCGAAAGAC GGCCAGCCCG CCCTGGCGAT CACGGATCTG AACAACCTGT TCGGCGCGAT CAAGTTTTAC AAGGAAGGCC GGGGCAAGGG CGTCAAGCCC ATCCTGGGCG CCGAAATCTA CCTGGAGGGC GAAGCGGCAG GCGCACCCTC GCGCATGGTG CTGCTGGTGC AGAACCGCAC CGGGTATCTG AACCTCTCCG AACTGCTGGC CCGCGCGTGG ACGCGCAACA TCGTCAGGAA CCAGGCGCTG TGCACCTGGG AGTGGCTGCA GGAATTGGGC GACGGCCTGA TAGCCCTCGC TGGAGCGCAG GCCGGTCCCG TGGGGCAGGC GCTCATGAAG GGCGATGACG CCGGAGCTGC GCAGCTGGCG CTGCGTCTGG CGGGCATCTT CCCGCACCGC TTCTACCTGG AGGTCCAGCG CGCCGGACGC CCTGACGACG AAGCCCATGT CACCGCGGCG GTACAGCTTG CCGCGCGCCT GGCCCTGCCG GTGGTAGCCA CCCACCCGGT GCAGTTCGCA ACGCCGGACG ATTACGAGGC GCACGAGGCG CGCGTGTGCA TTGCCGAGGG CGAGATCTTG GCGAATCCGC GGCGCGTGCG CCGTTTCACG CGCGAGCAGT ATTTCAAGAG CAGTGCCGAG ATGGAAGCGC TGTTCGCCGA CGTACCCAGC GCCCTCGCCA ACACCGTGGA GGTGGCCAAG CGCTGCAATG TGTCGCTGGT GCTGGGCAAG CCGCAACTGC CGAACTTCCC CATTCCGGGT GGGATGACGA TGGAGCAGTA CTTCCGCCAC GCGTCCCACG AGGGCCTGGA GGAGCGGCTG CTGCACCTGT ACCCGGACAC CGCCGAGCGC GACCGCCAGC GCCCCCGCTA CCAGGAGCGG CTGGAGTTTG AACTGGGCAC GATCCTGAAG ATGGGCTTTC CCGGCTACTT CCTCATCGTG GGTGACTTCA TCCAGTGGGC CAAGAAGAAC GGCTGCCCGG TGGGCCCCGG GCGCGGCTCG GGTGCGGGCT CGCTCGTGGC CTATGCGCTC AAGATCACGG ATCTGGATCC GCTGCAATAC AACCTGCTGT TCGAGCGCTT CCTGAACCCC GAGCGGGTGT CCATGCCCGA CTTCGACATC GATTTTTGCC AGGCCAACCG CGACCGCGTG ATCGACTATG TGAAGGACAA GTACGGCAAG GAGGCCGTGA GCCAGATCGC CACGTTCGGC ACGATGGCGG CCAAGGCTGC CATCCGCGAC GTGGGGCGGG TGATGGATAT GAGCTACACG TTCTGTGACG GTATCTCGAA GCTGGTGCCC GGCAAACCCG GCCAGACCTA TACGCTGGCC TACCCGCCAG AGCCCAAGAA GGAAGGGGAC AAGAACAACT ACGCCCTGGA GTTGGAACCC ATCCTGTACG AGCGCGTGCG CAAGGAGGAG GACGTGCGCA CCATCATCGA GATGGCGCAA AAGCTCGAAG GGATGACGCG CAATATTGGC ATGCACGCCG GCGGCGTGCT GATCGCGCCG GGCAAACTGA CCGATTTCTG CCCGCTGTAC CAGCAGCCAG GCAGCGAATC GGCGGTGAGC CAGTACGACA AGGACGACGT GGAGGCCATC GGCCTGGTGA AATTCGACTT CCTGGGCTTG GCGACGCTGA CCATCCTGGA AATCGCGCGT GAGTTCATCA TGCAGCGTCA CAAAGGGCAG GAAAACTTCG CGTTCGAGAA CATTCCCCTG GACGATGCTG CGACCTACAA ACTGTTCTCG GACGGCAAGA CAGAAGCCGT GTTCCAGTTT GAAAGCCGGG GCATGCAAGG CATGCTCAAG GAAGCGCGCC CAAGCAGGCT GGAAGACCTA ATCGCCTTGA ATGCCCTGTA CCGGCCCGGC CCCATGGACC TGATTCCCAG CTTCGTGAAC CGCAAGCACG GCAAGGAGGT GGTGGAGTAC CCGCATCCGC TGGTGGAGCC CGTGCTGGCC GAGACCTACG GCATCATGGT CTACCAGGAG CAGGTGATGC AGACGGCGCA GGTGCTGGGT GGTTACTCGC TCGGCGGCGC CGACATGCTG CGCCGCGCCA TGGGCAAGAA AAAGGCCGAG GAAATGGCCG AGCACCGTGC CATCTTCCGC AAGGGTGCAG CCGAAAAGGG TATCAGTCAG GACAAGGCCG ACGAGGTCTT CGACCTGATG GAAAAGTTTG CGGGTTACGG CTTCAACAAG TCGCACGCCG CCGCCTATTC GCTGCTGGCC TACCACACCG GGTGGCTCAA GGTGCACTAC ACGGCGGAGT TTTACTGCGC CAATATGACC GTGGAAATGG ACGACACCGA CAAGCTCAAG GTGCTCTATG AAGATGCGGT CAAACATTTC GGCATGACCT TCGAGCCGCC GGACATCAAC CGCGGCAATT ACCGCTTCGA GCCGGTGACG GACAAGGTCA TCCGCTATGG CCTGGGCGCA GTCAAGGGCA CGGGACAGCA GGCGATCGAG GCCATCATCG CTGCACGCGA AGGGCAGGGC GTGGGCCCAC AGGGCGCAAC CCGGGGGCCT TTCAAGAGCT TGTTTGACTT TTGCGTACGC GTGGACCGCA CGCGCGTCAA CAAGCGCACG GTGGAGGCGC TCATCAAGGC GGGCGCCTTC GATGCCCTGC AGCTCAACCG TGCCGCGCTC GTGGCATCCC TCGATCGGGC GTTCGAGTTT GCCAATGCGC AGATCGCCAA CGCCAACCAA GGCGGGCTGT TCGACATGAT GGGCGATGAC GCCATCGGCT CCAGCACGCA GGAGCCTGAT CTGGTGGATG TGATGCCCTG GGGCATCAAG GAACGGCTGA TGCAGGAGAA GACCGCGGTG GGCTTCTACC TCTCGGGCCA CCTGTTCGAT GAAGTGCACC AGGAAGTGCG CCGCTTCGTG CGCACTGCTA TCGACGAATT GGTGGACAGC CGCGAGACGC AGGTGGTCGC CGGCATCGTG AGTGACTACC GCGTCATCAA CGGGCAGCGC GGCAGGCTGG CGTTGTTCAA GCTGGACGAC AAGTCGGGCG TCATCGAGGC TTCCGCCGAC GAAGGGCTGA TCAATGCGAA CGCCGGCCTG CTCAAGGACG ATGAATTCGT AGTGGTGAGT GGTCGGCTGC AGTTGGACCA CTTCAGCGGA GGCCTGCGCA TGAAGGTGCA GCAGGTCTGG GATTTGGCGG GTGCGCGGGC ACGCTATGGG CGCTATCTGC AGGTGTGCCT GGGGCAGCAG TTGCCAGACA TCGGGGCGCT GGTGCGTGAC TATCCTCCGC AACGGGAGGA AACCGAGCAC GGCGAGGTGC TTACCCATGG CCTGCGCGTG CGCATGCAGT TGCGCTGCAC AGCGGCGGCT GGCGCGGCCA CGGCCGAGGT GCAGTTGGGA GAGGCCAGCC GGTTCTTTCC CAGCGATGCT GCGCTGGCCG CGTGGAGCGC TCAGGCGGGC AGCGGTGCTG TGAATGTGGT CTATGAGTAG
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Protein sequence | MFVHLRLHTE FSVVDGTTRI DEVVKAAAKD GQPALAITDL NNLFGAIKFY KEGRGKGVKP ILGAEIYLEG EAAGAPSRMV LLVQNRTGYL NLSELLARAW TRNIVRNQAL CTWEWLQELG DGLIALAGAQ AGPVGQALMK GDDAGAAQLA LRLAGIFPHR FYLEVQRAGR PDDEAHVTAA VQLAARLALP VVATHPVQFA TPDDYEAHEA RVCIAEGEIL ANPRRVRRFT REQYFKSSAE MEALFADVPS ALANTVEVAK RCNVSLVLGK PQLPNFPIPG GMTMEQYFRH ASHEGLEERL LHLYPDTAER DRQRPRYQER LEFELGTILK MGFPGYFLIV GDFIQWAKKN GCPVGPGRGS GAGSLVAYAL KITDLDPLQY NLLFERFLNP ERVSMPDFDI DFCQANRDRV IDYVKDKYGK EAVSQIATFG TMAAKAAIRD VGRVMDMSYT FCDGISKLVP GKPGQTYTLA YPPEPKKEGD KNNYALELEP ILYERVRKEE DVRTIIEMAQ KLEGMTRNIG MHAGGVLIAP GKLTDFCPLY QQPGSESAVS QYDKDDVEAI GLVKFDFLGL ATLTILEIAR EFIMQRHKGQ ENFAFENIPL DDAATYKLFS DGKTEAVFQF ESRGMQGMLK EARPSRLEDL IALNALYRPG PMDLIPSFVN RKHGKEVVEY PHPLVEPVLA ETYGIMVYQE QVMQTAQVLG GYSLGGADML RRAMGKKKAE EMAEHRAIFR KGAAEKGISQ DKADEVFDLM EKFAGYGFNK SHAAAYSLLA YHTGWLKVHY TAEFYCANMT VEMDDTDKLK VLYEDAVKHF GMTFEPPDIN RGNYRFEPVT DKVIRYGLGA VKGTGQQAIE AIIAAREGQG VGPQGATRGP FKSLFDFCVR VDRTRVNKRT VEALIKAGAF DALQLNRAAL VASLDRAFEF ANAQIANANQ GGLFDMMGDD AIGSSTQEPD LVDVMPWGIK ERLMQEKTAV GFYLSGHLFD EVHQEVRRFV RTAIDELVDS RETQVVAGIV SDYRVINGQR GRLALFKLDD KSGVIEASAD EGLINANAGL LKDDEFVVVS GRLQLDHFSG GLRMKVQQVW DLAGARARYG RYLQVCLGQQ LPDIGALVRD YPPQREETEH GEVLTHGLRV RMQLRCTAAA GAATAEVQLG EASRFFPSDA ALAAWSAQAG SGAVNVVYE
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