Gene Dtpsy_1894 details

Gene Information

• Locus tag: Dtpsy_1894
• ID: 7382255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 2017945
• End bp: 2019915
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643655211
• Product: ABC transporter related
• Protein accession: YP_002553351
• Protein GI: 222111087
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACCC TGAAGAACGT CACGCTGCGC CGCAGCGCCA AGGTATTGCT CGACGGTGTC 
TCCGTCACCA TCAACCCCGG GGAGCATGTC GGCCTGGTCG GGCGTAACGG CGCTGGCAAG 
TCCACGCTGT TTGCGCTGCT CAATGGTTCG CTGCACGAAG ACGGCGGTGA CTTCGTCCTG 
CCCGCGGCCT GGCGCATGGC CCAGGTGGCG CAAAACATGC CAGAGACGGA CGAGTCTGCC 
ACCGCCTTCG TGTTGGATGG CGACACTCGC CTGACGGAGC TGCGCCAGGC GCTGCACACG 
GCCGAGCAGG CGGGTGATGG CATGGCCATC GCCCAGGCGC ACTCCGACCT GGCAGACGCC 
GGTGCGCACG ACGCGACCGC ACGCGCGCAG GCGCTCATCC TGGGGCTGGG CTTTCAGGTG 
GCGGAGCTGG AGCGCCCGGT CAACAGCTTC TCCGGCGGTT GGCGCATGCG CCTGCAACTG 
GCGCGCGCGC TGATGTGCCC CAGCGACCTG CTGCTGCTGG ACGAGCCCAC CAACCACTTG 
GACCTGGACG CGCTGGTATG GCTGGAAGCC TGGCTGCAGC GCTACAACGG TACCTTGGTC 
GTCATCAGCC ACGACCGCGA ATTCCTCGAC GCCGTGACCC AGGTCACGCT GCACATCGAT 
AACGCGCGCC TGACCCGCTA CGGCGGCAAC TACAGCAAGT TCGAGGAGCT GCGCGCCCAG 
CAGCTGGAAC TGCAGCAGTC GGCCTATGAG CGCCAGCAGG ACAAGATCGC GCACCTGCAG 
AAATTCATCG ATCGGTTCAA GGCCAAGGCC ACCAAGGCCA AACAGGCACA AAGCCGCGTG 
AAGGCGCTGG AGCGCATGGA GAAGATCGCC CCCGTGCTGG CCTCGGCCGA CTTCACCTTC 
GAGTTCAAGG AGCCGGCCAA CCTGCCCAAC CCGATGCTGG CCATCACCGA CGCGTCCTTC 
GGTTATCGCG CCGAGGATGG CAGCGAGACC ACCATCCTGC GCCACGTGAA CCGCTCGGTA 
CTGGCCGGCC AGCGCATCGG CATTTTGGGC GCCAACGGCC AGGGCAAGTC CACGCTGGTC 
AAGACCATCG CCCGCACCAT GGCGCCGCTC TCCGGCACCC TGACCGAGGG CAAGGGCCTG 
TCGATCGGCT ACTTCGCGCA GCAGGAGCTG GACGTGCTGC GTCCCGGCGA TAACCCGCTG 
GAGCACATGG TGCGCCTGGC GCGCGAACTG GGTGCCCAGG CCCAGGAACC CAGCCGCGAA 
CAGGACCTGC GCAACTTCCT GGGCAGCTTC AACTTCAGCG GCGACATGGT GCACCAGGCC 
GTGGGCACCA TGAGCGGCGG GGAGAAGGCC CGCCTGGTGC TGGCCATGAT CGTCTGGCAG 
CGTCCCAACC TGTTGCTGCT GGACGAGCCC ACCAATCACC TGGACCTGGC CACGCGCGAG 
GCGTTGTCCA TGGCGCTCAA CGAGTTCGAG GGCACGGTGA TGCTGGTCAG CCACGACCGG 
GCGCTGCTGC GCGCCGTGTG CGATGAGTTC TGGCTGGTGG GCCGGGGTGC CGTGGCGCCC 
TTCGACGGCG ATCTGGACGA TTACCAGCGC TACCTGCTTG AGGAGTCCAA GCGCCTGCGC 
GAACTGGCCC GCGCAGCCGA GCAGGCGGTC GTTGCCGAGG CCGCGCCCCC AACCGCCACT 
GCCGCCCCTC CCCAGCGCGA CGCACGCGAG CAGCGCCGCC AGGAAGCCCA GGCCCGCCAA 
CAGTTGGCCG AGAAAACCCG CCCCCTCAAG CGAGAGCTTG AAAAAATCGA CCAGCGCCTG 
GAAGCCCTGA ACCGGGAAAA AGCGCAGTTG GAAGAACGGC TCATGCAGCC GTTGCCCCCC 
GCGGAGATCG CGGAATGCGG GCGGAGGCTC AAGGACTGCG CCGAAGAGGT GACAGCCCTT 
GAGGAAAAGT GGCTGGATGT TTCCTCAGCG CTGGAGGAAC TGGCGCGCTG A 

 

Protein sequence

MITLKNVTLR RSAKVLLDGV SVTINPGEHV GLVGRNGAGK STLFALLNGS LHEDGGDFVL 
PAAWRMAQVA QNMPETDESA TAFVLDGDTR LTELRQALHT AEQAGDGMAI AQAHSDLADA 
GAHDATARAQ ALILGLGFQV AELERPVNSF SGGWRMRLQL ARALMCPSDL LLLDEPTNHL 
DLDALVWLEA WLQRYNGTLV VISHDREFLD AVTQVTLHID NARLTRYGGN YSKFEELRAQ 
QLELQQSAYE RQQDKIAHLQ KFIDRFKAKA TKAKQAQSRV KALERMEKIA PVLASADFTF 
EFKEPANLPN PMLAITDASF GYRAEDGSET TILRHVNRSV LAGQRIGILG ANGQGKSTLV 
KTIARTMAPL SGTLTEGKGL SIGYFAQQEL DVLRPGDNPL EHMVRLAREL GAQAQEPSRE 
QDLRNFLGSF NFSGDMVHQA VGTMSGGEKA RLVLAMIVWQ RPNLLLLDEP TNHLDLATRE 
ALSMALNEFE GTVMLVSHDR ALLRAVCDEF WLVGRGAVAP FDGDLDDYQR YLLEESKRLR 
ELARAAEQAV VAEAAPPTAT AAPPQRDARE QRRQEAQARQ QLAEKTRPLK RELEKIDQRL 
EALNREKAQL EERLMQPLPP AEIAECGRRL KDCAEEVTAL EEKWLDVSSA LEELAR