| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1878 |
|---|
| Symbol | |
|---|
| ID | 7382239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 1999940 |
|---|
| End bp | 2000479 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643655195 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_002553335 |
|---|
| Protein GI | 222111071 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTCA ACAGCTCCGA CGACGACAGC CAGCAACGCT TCGCACTCGG GTTCCTCTTT
GCGCTGATCG CGCTGGTGGT CTCCACCGTC GTGGGCGTGG TGGTCTACAA GCGTGGCATT
GCCCACGCCC CCAAGGCGCC GGCCGCCGCC GTGGCCCCTG CGGCTGAGGC AGCCGCGCCC
GGCGTGGTGA TCATGATCAC CGAGGACGCC GCCAGCGTGG TGGTGGAGGG CGGTGTGGTG
AAGTTCTTCT TCGCCACCGG CAAGGCCGAG CTGGCCCCGG GCGCCAACGA AGCGCTGGGC
GACGTGGTCA AGGGCGTGGT GGACGGCGGC AAGACCGCGG TGGTGTCGGG CTTCCATGAC
GCCACGGGCG ACGCGGCCGT GAACGCCGAG CTGGCCAAGC AGCGCGCGCT GGCCGTGCGC
GACGCCCTGA AGGCCCTGGG TGTGGCCGAA GAGAAGGTGG AGCTGAAGAA GCCCGAAGCC
ACGCAGGGCA GCGGCAGCAA TGCCGAGGCG CGCCGCGTGG AGGTGATTCT GGCTCCCTGA
|
|---|
| Protein sequence | MSFNSSDDDS QQRFALGFLF ALIALVVSTV VGVVVYKRGI AHAPKAPAAA VAPAAEAAAP
GVVIMITEDA ASVVVEGGVV KFFFATGKAE LAPGANEALG DVVKGVVDGG KTAVVSGFHD
ATGDAAVNAE LAKQRALAVR DALKALGVAE EKVELKKPEA TQGSGSNAEA RRVEVILAP
|
|---|
| |