Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1847 |
Symbol | |
ID | 7382208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1965500 |
End bp | 1967329 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643655164 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002553304 |
Protein GI | 222111040 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCCT CCACCCCCGA CCTGCGCGGC GTGCAGACGC TGCCCGAACT GCTGGCGTTC CGCGCCGCCC TCACTCCCCA CAGCGAGGCC TACCGTGCCT GCGACCCCGG CACCGGCCAG TGGATCAGCC TGACCTGGGC TCAGACCCAG GAGCGCGTGC AGCAGTGGGG CCGCGCCATT GCCGCATCGG GCCTGCCACA GGGGGCGCGC ATCGCCATCC TGCTGCCCAA CGGGCTGGAT GCCATGAGCA TCGACCAGGC CGTGATGGCC ACGGGCTGTG TGCCCGTGCC CCTGCATGCC ATCGACAATC CGGGCAGCAT CGCCTACATC CTGGCGGATG CCGAGGTGTC GCTGCTCGTC GTGGAAGAAC CCGAGCAATG GCGGCGCATC CGCGACGTGG GCATGCCGCT TCCGCACCTG ATGGGCGTGG TGACGACCAA CGCCAGCACC GGGCTGCCCA CCGCCGCCGA GCAGGACGTA CCGGTCGCAC CACTGGCTGC ATGGCTGCAG CATGCCGCGG CAGATACGCC GCTGCCCCCG CCGCCCGGCC CTGAGGATCT GGCGGCGATC GTCTACACCA GCGGCACCAC CGGCAAGCCC AAGGGGGTGA TGCTCAGCCA TGCCAACGTG GTGGCCGACG TGAAGGCGGT GCTGGAGCGC ATCGCCCCCA CGCCACAGGA TGTGTTCCTG TCCTTCCTGC CGCTGTCGCA CACCTTCGAG CGCACGGGCG GCTACTACCT GCCCATGGCC TCGGGCAGTT GCGTGGTCTA TGCGCGCTCG GTGGCGCAAC TGGCGGAGGA CTTGAAGAAT GTGCGCCCCA CGGTGCTGGT GTCGGTGCCG CGCATTTATG AACGCGTGCA TGCCAAGCTC ATCGAGACGC TGTCGCCCTC GCCCTTGAAG ATGCAGCTGT TCCAGGCCGC GCAGGCCGTG GGCTGGAAGC GGTTTTGCGC CGCGCAGCGC CTGCCAGCAC CCCAGGACGA CGGCGCGGGC GGCTGGATGC GCGCCCTGCC CTGGCCGCTG CTGCGTGCGC TGGTGGCCAA GCCGCTGCTG GCGCAGTTCG GTGGCCGCGT GCGCGTGGCC GTGAGCGGGG GCGCGCCGCT GTCGCCCACC ATCGCGCACT GCTTCCTGGG CCTGGGCCTG CAACTGGTGC AGGGCTACGG CATGACCGAA ACCACGCCCG TGGTCAGCGT GAACACGCTG GAGGATAACG ACCCGTCTAC CGTCGGCCGC GCCTTGCCGG GCGTGGAGGT GCGCATCGGC GAGAACCGCG AACTGCAGGT GCGCGGCCCC ATCGTCATGA AGGGCTACTG GAAGCGCCCC GAGGATACGG CCCGCACCGT CTCCGCCGAC GGCTGGCTGG GCACGGGCGA CCAGGCCGAG ATCGTCGACG GCCGCATCCG CATCCTGGGA CGCATCAAGG AAATCATCGT CACCTCCACG GGCGAGAAGG TGCCGCCGGC CGACCTGGAG CTGGCCATCA CCGCCGATGC ACTGTTCGAG CAGGCCTTTG TGGTGGGCGA GCAGCGCCCC TTCATCGCCT GCGTGGCCGT GGTGCATGCC GAAGAGTGGC GCCAACTGGC CGGGCAACTG GGACTGGACG CCAACGACCC TGCCAGCCTT GCGCACCCCA GCGCCCAACG GGCGGCACTG GCGCGCATCG AGAAGCTGGC GGCCGGCTTC CCGCGCTATG CGGTGCCGCG CGCCGTGCAT CTGGTGCGCG AGCCATGGAC GATCGAGAAC GCGTTCATGA CACCCACGCT CAAGCTCAAG CGCACCAACC TCATGGCGCA CTACGCGGCC GCCATCGAGG CCATGTACCA AAAGCGCTGA
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Protein sequence | MNSSTPDLRG VQTLPELLAF RAALTPHSEA YRACDPGTGQ WISLTWAQTQ ERVQQWGRAI AASGLPQGAR IAILLPNGLD AMSIDQAVMA TGCVPVPLHA IDNPGSIAYI LADAEVSLLV VEEPEQWRRI RDVGMPLPHL MGVVTTNAST GLPTAAEQDV PVAPLAAWLQ HAAADTPLPP PPGPEDLAAI VYTSGTTGKP KGVMLSHANV VADVKAVLER IAPTPQDVFL SFLPLSHTFE RTGGYYLPMA SGSCVVYARS VAQLAEDLKN VRPTVLVSVP RIYERVHAKL IETLSPSPLK MQLFQAAQAV GWKRFCAAQR LPAPQDDGAG GWMRALPWPL LRALVAKPLL AQFGGRVRVA VSGGAPLSPT IAHCFLGLGL QLVQGYGMTE TTPVVSVNTL EDNDPSTVGR ALPGVEVRIG ENRELQVRGP IVMKGYWKRP EDTARTVSAD GWLGTGDQAE IVDGRIRILG RIKEIIVTST GEKVPPADLE LAITADALFE QAFVVGEQRP FIACVAVVHA EEWRQLAGQL GLDANDPASL AHPSAQRAAL ARIEKLAAGF PRYAVPRAVH LVREPWTIEN AFMTPTLKLK RTNLMAHYAA AIEAMYQKR
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