Gene Dtpsy_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1793 
Symbol 
ID7382560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1909227 
End bp1910138 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content64% 
IMG OID643655110 
Product5-dehydro-4-deoxyglucarate dehydratase 
Protein accessionYP_002553250 
Protein GI222110986 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.133683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCCC AAGACCTGAA GAACGTGATG AGTTCCGGCC TGCTGTCGTT CCCCATCACC 
GACTTCCATG ACAACGGCGA CTTCAATGCC AAGGGCTATG CCGAGCGCCT GGAGTGGCTC
GCTCCGTTCG GCGCCAGCGC ATTGTTTGCT GCGGGCGGCA CGGGCGAGTA CTTCTCGCTC
ACGGCCAGCG AATATCCGCA GATCATCCAG ACGGCGGTAA ACACCTGCCG CGGCAAGGTG
CCCATCATTG CCGGTGCGGG CGGCCCCACG CGCTTTGCCA TCGAATGCGC GCAGGCCGCC
GAGAAGGCCG GCGCGCACGG CATCCTGCTC ATGCCCCACT ACATGACAGA AGCCAGCCAA
GAAGGCCTGG CAGCCCACGT GGAAGCCGTG TGCAAGAGCG TGAACTTCGG CGTGATCATC
TACAACCGCG GCATCACCCG CTACACGCCG GAAACCGTTG CCCGCCTGTG CGAGCGCAAC
CCGAACCTGG TCGGCTTCAA GGATGGCGTG GGCGACATCG AGGGCATGGC CTCCATGTTC
CTGGCCATGG GCGACCGCCT GGCCTACCTG GGCGGCCTGC CCACGGCCGA GGTCTATGCC
GCCGCCTACA AGGCGCTGGG CACGCCGGTG TATTCGTCCG CCGTGTTCAA CTTCATCCCG
AAAACAGCCA TGCGTTTCTA CGAAGCGGTG AAGAACGACG ACCAGGCCAC GCAGCACCAG
TTGCTCAAGG ACTTCTTCAT GCCTTACCTG AAGATCCGCA ACCGCAGCGC CGGCTACGCG
GTGAGCATCA TCAAAGCCGG CGCCAAGATC GTCGGCCACC CCGCCGGCCC CGTGCGTGCG
CCGCTGGCCG ACCTGCAGGC TGAAGAGATC GAGATGCTGG CCGAACTGAT CCGCAAGGTC
GAGCCTGTCT GA
 
Protein sequence
MTPQDLKNVM SSGLLSFPIT DFHDNGDFNA KGYAERLEWL APFGASALFA AGGTGEYFSL 
TASEYPQIIQ TAVNTCRGKV PIIAGAGGPT RFAIECAQAA EKAGAHGILL MPHYMTEASQ
EGLAAHVEAV CKSVNFGVII YNRGITRYTP ETVARLCERN PNLVGFKDGV GDIEGMASMF
LAMGDRLAYL GGLPTAEVYA AAYKALGTPV YSSAVFNFIP KTAMRFYEAV KNDDQATQHQ
LLKDFFMPYL KIRNRSAGYA VSIIKAGAKI VGHPAGPVRA PLADLQAEEI EMLAELIRKV
EPV