Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1793 |
Symbol | |
ID | 7382560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1909227 |
End bp | 1910138 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643655110 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | YP_002553250 |
Protein GI | 222110986 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.133683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCCCC AAGACCTGAA GAACGTGATG AGTTCCGGCC TGCTGTCGTT CCCCATCACC GACTTCCATG ACAACGGCGA CTTCAATGCC AAGGGCTATG CCGAGCGCCT GGAGTGGCTC GCTCCGTTCG GCGCCAGCGC ATTGTTTGCT GCGGGCGGCA CGGGCGAGTA CTTCTCGCTC ACGGCCAGCG AATATCCGCA GATCATCCAG ACGGCGGTAA ACACCTGCCG CGGCAAGGTG CCCATCATTG CCGGTGCGGG CGGCCCCACG CGCTTTGCCA TCGAATGCGC GCAGGCCGCC GAGAAGGCCG GCGCGCACGG CATCCTGCTC ATGCCCCACT ACATGACAGA AGCCAGCCAA GAAGGCCTGG CAGCCCACGT GGAAGCCGTG TGCAAGAGCG TGAACTTCGG CGTGATCATC TACAACCGCG GCATCACCCG CTACACGCCG GAAACCGTTG CCCGCCTGTG CGAGCGCAAC CCGAACCTGG TCGGCTTCAA GGATGGCGTG GGCGACATCG AGGGCATGGC CTCCATGTTC CTGGCCATGG GCGACCGCCT GGCCTACCTG GGCGGCCTGC CCACGGCCGA GGTCTATGCC GCCGCCTACA AGGCGCTGGG CACGCCGGTG TATTCGTCCG CCGTGTTCAA CTTCATCCCG AAAACAGCCA TGCGTTTCTA CGAAGCGGTG AAGAACGACG ACCAGGCCAC GCAGCACCAG TTGCTCAAGG ACTTCTTCAT GCCTTACCTG AAGATCCGCA ACCGCAGCGC CGGCTACGCG GTGAGCATCA TCAAAGCCGG CGCCAAGATC GTCGGCCACC CCGCCGGCCC CGTGCGTGCG CCGCTGGCCG ACCTGCAGGC TGAAGAGATC GAGATGCTGG CCGAACTGAT CCGCAAGGTC GAGCCTGTCT GA
|
Protein sequence | MTPQDLKNVM SSGLLSFPIT DFHDNGDFNA KGYAERLEWL APFGASALFA AGGTGEYFSL TASEYPQIIQ TAVNTCRGKV PIIAGAGGPT RFAIECAQAA EKAGAHGILL MPHYMTEASQ EGLAAHVEAV CKSVNFGVII YNRGITRYTP ETVARLCERN PNLVGFKDGV GDIEGMASMF LAMGDRLAYL GGLPTAEVYA AAYKALGTPV YSSAVFNFIP KTAMRFYEAV KNDDQATQHQ LLKDFFMPYL KIRNRSAGYA VSIIKAGAKI VGHPAGPVRA PLADLQAEEI EMLAELIRKV EPV
|
| |