| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1688 |
|---|
| Symbol | |
|---|
| ID | 7385252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 1789398 |
|---|
| End bp | 1790798 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643655004 |
|---|
| Product | lytic murein transglycosylase |
|---|
| Protein accession | YP_002553145 |
|---|
| Protein GI | 222110881 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTC TCTTCATGCC CGACACCCTC GCCCGGCGCC GCGCCGCCGC CTCCGCACTG
GGCGTGGCAG CACTGGCGGG GTGCGCCTCC GCTCCGCCAG CGACCCCCGC CGTAGCGGCT
CCATCCGCTG CACCCAGCGC CCCTGCGCCC GCGCCGGTTA TCCCCCAACT GCCGTCGCCC
GCAGCGCCCA CCACCCCGGC GCCTGCCCCG GCAACATCCA CCGTGGAACC TGCGAGCACG
CCGGTCGCGC CGCCGGCGCC CGACACCACC GCAACCACGC TGGCCGGCTT CCACGCCTGG
GTGAGCGCCT TTGCACGCGA GGCGCTGGCC GCCGGCATCC GCCCGCAGAC CGTGGCCGCC
ACCCTGGGCC AGGCGCAGTG GCAACCGCGC GTGGTGGAAC TGGACCGCGC CCAGCCCGAA
TTCACCCGCC CGCCCTGGGC CTACCTGGAC AGCGCAGTGT CATCCCAGCG CATTGCGCAG
GGACGCGAGC AGCGGCACCA GTACGCCGAC GCGCTGGACG CGGCAGCGCA GCGCTACGGC
GTGCCCGCCA GCGTGGTCAC GGCCATCTGG GGCATGGAGA GCAACTATGG CCGCAACTTC
GGCAGCTTCC GCACCGTGGA TGCGCTGGCG ACCCTCGCCT ACGACGGGCG CCGCAGCGCA
TGGGCCCAGC GGGAGCTGCT GGCCGCGTTG CGCATCGTGG ACCAGGGCGA CATCGCGGCC
GACGCGCTCA TCGGCTCCTG GGCCGGAGCC ATGGGGCACA CGCAGTTTCT GCCCTCGGTG
TTCCTTGCCC ATGCGGTGGA TGCCGACGGG GACGGGCGGC GCGATATCTG GGGCAGCGTG
CCCGACGTGG TGGCGTCCAC GGCCAACTTC CTGGCCCATT CGGGCTGGAA GAGCGGTGAG
CCGTGGGGCG CCGAAGTGCT GCTGCCGCCC GGCTTCGACT ACGCACGCGC CGAACTGAGC
GTGCGCCAAG CCAGCAGCGA CTGGGCCGCT GAAGGGGTGC GCGGCGTGGG TGACGCGGAG
CTGCCGCCGC TGCAGGACGC CTCCGTCCTT ACCCCGGCAG GCGCGCGTGG ACCCGCCATC
CTGGTCGGGC CCAACTTCCG CGCGCTGCTG CGCTACAACA ACTCGGTGAA CTACGCCCTG
GCCGTGGGCC TGCTGGCACG GCAGATCGAC GGCGGCGCGG GCCTGGCATC CGCCTGGCCG
CGCGAACTGC AGCCTCTGTC GCGCAGCGAA GTACGCGCGC TGCAGGAGGC GCTGAATGCA
CGCGGCCTGG ACACCGGCAC GCCCGACGGC GTGGCAGGAC CCGCCACGCG CGCTGGGGTG
CGCCGCTACC AGCAAAGTGT GGGCTTGCCC GCCGATGGCT ATGCCACGCG CGAACTATTG
CAGCGACTGC TGACGCCCTG A
|
|---|
| Protein sequence | MRFLFMPDTL ARRRAAASAL GVAALAGCAS APPATPAVAA PSAAPSAPAP APVIPQLPSP
AAPTTPAPAP ATSTVEPAST PVAPPAPDTT ATTLAGFHAW VSAFAREALA AGIRPQTVAA
TLGQAQWQPR VVELDRAQPE FTRPPWAYLD SAVSSQRIAQ GREQRHQYAD ALDAAAQRYG
VPASVVTAIW GMESNYGRNF GSFRTVDALA TLAYDGRRSA WAQRELLAAL RIVDQGDIAA
DALIGSWAGA MGHTQFLPSV FLAHAVDADG DGRRDIWGSV PDVVASTANF LAHSGWKSGE
PWGAEVLLPP GFDYARAELS VRQASSDWAA EGVRGVGDAE LPPLQDASVL TPAGARGPAI
LVGPNFRALL RYNNSVNYAL AVGLLARQID GGAGLASAWP RELQPLSRSE VRALQEALNA
RGLDTGTPDG VAGPATRAGV RRYQQSVGLP ADGYATRELL QRLLTP
|
|---|
| |