Gene Dtpsy_1687 details

Gene Information

• Locus tag: Dtpsy_1687
• ID: 7385251
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 1788595
• End bp: 1789305
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643655003
• Product: ABC transporter related
• Protein accession: YP_002553144
• Protein GI: 222110880
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGGA AAGGGATCCA CATCGAGCGC CTGACCAAGC GCTACGGCTC CGGCGACACG 
GCGTTCCTCG CCCTCAAGGA CGTGAACATG CACGTGGCAC CGGGTGAGGT GGTGGGCCTG 
ATCGGCCCGT CCGGCTCGGG CAAGAGCACG CTGCTCAAGT GCCTGGGCGC GGTGATCGAC 
CCCACGTCGG GCCGCATGAC GCTGGGCGAT ACGGTGATCT ATGACGACGG CTGGCAAGTA 
CCCGACCTGC GCGCGCTGCG CCGCGACCAG ATCGGCTTCG TGTTCCAGGC GCCGTACCTG 
ATCCAGTTTC TGGATGCCAC CGACAACGTG GCGCTGCTGC CCATGCTGGC CGGCGTGCCC 
AACGACGAGG CGCGCCGCCG CGCACTGGAG TTGCTCACGG CCCTGGACGT GCAGCACCGC 
GCCACGGCCA TGCCATCGCA ACTGTCGGGC GGGGAGCAGC AGCGTGTGGC CATCGCCCGC 
GGCTTGGTCA ACCGCCCGCC GGTGATCCTG GCCGACGAGC CCACGGCGCC GCTGGATTCG 
CAACGTGCCA TGGCGGTGAT CCGCATCCTG AACGACATGG CGCGGCGCCT GGAAACGGCC 
ATCATCGTCG TCACGCACGA CGAGAAGATC ATTCCCACCT TCAAGCGCAT CTACCACATA 
CGCGACGGCG TGACCCACGA GGAGGCGGGC GAGGGTCGCG GCTTCGAGTG A 

 

Protein sequence

MSRKGIHIER LTKRYGSGDT AFLALKDVNM HVAPGEVVGL IGPSGSGKST LLKCLGAVID 
PTSGRMTLGD TVIYDDGWQV PDLRALRRDQ IGFVFQAPYL IQFLDATDNV ALLPMLAGVP 
NDEARRRALE LLTALDVQHR ATAMPSQLSG GEQQRVAIAR GLVNRPPVIL ADEPTAPLDS 
QRAMAVIRIL NDMARRLETA IIVVTHDEKI IPTFKRIYHI RDGVTHEEAG EGRGFE