Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1685 |
Symbol | |
ID | 7385249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1786237 |
End bp | 1787388 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643655001 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002553142 |
Protein GI | 222110878 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTC CACGTTTGCA GCGTCGCACG TTGGCGCTGA TAGCCGTCAT TGCGCCACTG ATGGTGCTGT TCGTCTATGT CGCACTGCGG TCAGGGCCGT TGGCTCCGGT GGCGGTCACG CTGGGCAGCG TGCAATCGCG CGCCATTGCC CCGGCACTCT CGGGCATAGG CACGGTGCAG GCGCGTTATC TGTACAAGAT CGGCCCCACC TTCGCCGGGC GCGTGCAGCG CCTGGACGTG CAGGTGGGTG ACATGGTTCA GGCCGGGCAG GTGCTGGGCG AGATGGACCC AGTGGACCTG GACGACCGCC TGCGCGCACA GCAGGCGGCC ATCAAGAGCG CCGAGGCCGC GCTGCGCCAG GCAGAGGCCA GGCAGAGCTA TGCGCAGACC CAGCACCAGC GCTACGGGCA ACTGGTGGCG GTGCGCGGCA CCAGCGAGGA AAGCTACGCC ACCAAGCAGC AGGAACTGGC CGTGGCGGAC GCCGCGCTCG CCGCTGCCCG CGAGGATGCG AGCCGTCTGC GCGCTGACTT GCAGGCATTG CGCGCGCAGC GTGGCAACCT GCGGCTGGTG TCGCCCGTGG CCGGCATGGT GGCTGCGCGC GATGCCGACC CTGGCACGAC CGTGGTGGCG GGGCAGGCAG TGGTGAAGCT CATCGACCCG GCCAGCCTGT GGATCGACAC GCGCTTTGAC CAGATCACCG CCCAAGGGTT GGCGGCGCAG CTACCGGCCG AGGTGGTGCT GCGCTCGCGC CGCGGGGACA ACCTGGTCGG CAGCGTGCTG CGCGTCGAGC CCCTGGCGGA CGCGGTGACA GAGGAGACGC TGGCCAAGAT CGTCTTCGAT GCACCGGTTA CACCGCTGCC CCCCGTCGGT GAACTGGCCG AGGTCACCGT GCGCCTGCCG GCACTGCCCG AAGCGCCCAC CATTCCCAAT GCGGCCATCC GCTTCGTGGA CGGGCAGCGC GGCGTGTGGA AGCTGGTCAG TGGCAAGCCG CAGTTTGCGC AGGTACGCCT GGGCCGTGCG GACCTCGACG GCCATGTGCA GGTGCTGGAC GGGCTGGCCG TGGGCGACTC CATCGTGGTG TACAGCGAGA GGGCGCTCAC GGCGCGTAGC CGCGTGCACG TGGTTGAGCG CATTGCCGGA GTGGCGCCGT GA
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Protein sequence | MKFPRLQRRT LALIAVIAPL MVLFVYVALR SGPLAPVAVT LGSVQSRAIA PALSGIGTVQ ARYLYKIGPT FAGRVQRLDV QVGDMVQAGQ VLGEMDPVDL DDRLRAQQAA IKSAEAALRQ AEARQSYAQT QHQRYGQLVA VRGTSEESYA TKQQELAVAD AALAAAREDA SRLRADLQAL RAQRGNLRLV SPVAGMVAAR DADPGTTVVA GQAVVKLIDP ASLWIDTRFD QITAQGLAAQ LPAEVVLRSR RGDNLVGSVL RVEPLADAVT EETLAKIVFD APVTPLPPVG ELAEVTVRLP ALPEAPTIPN AAIRFVDGQR GVWKLVSGKP QFAQVRLGRA DLDGHVQVLD GLAVGDSIVV YSERALTARS RVHVVERIAG VAP
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