Gene Dtpsy_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1685 
Symbol 
ID7385249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1786237 
End bp1787388 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content69% 
IMG OID643655001 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002553142 
Protein GI222110878 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTC CACGTTTGCA GCGTCGCACG TTGGCGCTGA TAGCCGTCAT TGCGCCACTG 
ATGGTGCTGT TCGTCTATGT CGCACTGCGG TCAGGGCCGT TGGCTCCGGT GGCGGTCACG
CTGGGCAGCG TGCAATCGCG CGCCATTGCC CCGGCACTCT CGGGCATAGG CACGGTGCAG
GCGCGTTATC TGTACAAGAT CGGCCCCACC TTCGCCGGGC GCGTGCAGCG CCTGGACGTG
CAGGTGGGTG ACATGGTTCA GGCCGGGCAG GTGCTGGGCG AGATGGACCC AGTGGACCTG
GACGACCGCC TGCGCGCACA GCAGGCGGCC ATCAAGAGCG CCGAGGCCGC GCTGCGCCAG
GCAGAGGCCA GGCAGAGCTA TGCGCAGACC CAGCACCAGC GCTACGGGCA ACTGGTGGCG
GTGCGCGGCA CCAGCGAGGA AAGCTACGCC ACCAAGCAGC AGGAACTGGC CGTGGCGGAC
GCCGCGCTCG CCGCTGCCCG CGAGGATGCG AGCCGTCTGC GCGCTGACTT GCAGGCATTG
CGCGCGCAGC GTGGCAACCT GCGGCTGGTG TCGCCCGTGG CCGGCATGGT GGCTGCGCGC
GATGCCGACC CTGGCACGAC CGTGGTGGCG GGGCAGGCAG TGGTGAAGCT CATCGACCCG
GCCAGCCTGT GGATCGACAC GCGCTTTGAC CAGATCACCG CCCAAGGGTT GGCGGCGCAG
CTACCGGCCG AGGTGGTGCT GCGCTCGCGC CGCGGGGACA ACCTGGTCGG CAGCGTGCTG
CGCGTCGAGC CCCTGGCGGA CGCGGTGACA GAGGAGACGC TGGCCAAGAT CGTCTTCGAT
GCACCGGTTA CACCGCTGCC CCCCGTCGGT GAACTGGCCG AGGTCACCGT GCGCCTGCCG
GCACTGCCCG AAGCGCCCAC CATTCCCAAT GCGGCCATCC GCTTCGTGGA CGGGCAGCGC
GGCGTGTGGA AGCTGGTCAG TGGCAAGCCG CAGTTTGCGC AGGTACGCCT GGGCCGTGCG
GACCTCGACG GCCATGTGCA GGTGCTGGAC GGGCTGGCCG TGGGCGACTC CATCGTGGTG
TACAGCGAGA GGGCGCTCAC GGCGCGTAGC CGCGTGCACG TGGTTGAGCG CATTGCCGGA
GTGGCGCCGT GA
 
Protein sequence
MKFPRLQRRT LALIAVIAPL MVLFVYVALR SGPLAPVAVT LGSVQSRAIA PALSGIGTVQ 
ARYLYKIGPT FAGRVQRLDV QVGDMVQAGQ VLGEMDPVDL DDRLRAQQAA IKSAEAALRQ
AEARQSYAQT QHQRYGQLVA VRGTSEESYA TKQQELAVAD AALAAAREDA SRLRADLQAL
RAQRGNLRLV SPVAGMVAAR DADPGTTVVA GQAVVKLIDP ASLWIDTRFD QITAQGLAAQ
LPAEVVLRSR RGDNLVGSVL RVEPLADAVT EETLAKIVFD APVTPLPPVG ELAEVTVRLP
ALPEAPTIPN AAIRFVDGQR GVWKLVSGKP QFAQVRLGRA DLDGHVQVLD GLAVGDSIVV
YSERALTARS RVHVVERIAG VAP