| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1672 |
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| Symbol | |
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| ID | 7384746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1771458 |
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| End bp | 1773680 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643654989 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_002553130 |
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| Protein GI | 222110866 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.672303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACCGG GCCTGACCCT TTCCGGCATG ACTGAACAAT CCAGCCTTTT TCCGGCTCCC
GCGCCCAAGG GGTCTGCGCT GGTAGCTGCA AAAATCAAAG CGCTGCGCGA GCAGTTGAAC
CGCTGGGCGC ACGAGTACTA CGTCCAGGAC ACGCCGAGCG TGCCCGATGC CGAGTATGAC
CGCGCGTTCC AGGAATTGCA GGCGCTGGAG GGCGCTTACC CCGACCTGGT GACGCCCGAC
TCGCCCACGC AGCGCGTGCT GGGCGCGGTG CTGGACGGGC TGACACCGGT GCGCCACCGC
GTGCCCATGC TCAGCATCCG CACCGAAACC GACACCGAGG CCAGCGGCGC CCAAGCCTTC
GACGCGCGCG TGCGCCGTGA ACTGAAGCTG CCGCCCGATG CGCCGCCGGT GGAATACGTG
GCCGAACCCA AGTTCGACGG CCTGGCGATG AGCCTGCGCT ACGAGGGCGG GCGCCTGGTG
CAGGCCGCCA CGCGCGGTGA CGGCGAGGTG GGCGAGGACG TGACGCACAA CGTGCGCACC
ATCCGCCAGA TCCCCCTGAG CCTGCCCGCC GGCGTGCCGC GGGTGCTGGA GGTGCGCGGG
GAGGTCTACA TGCGCCGCGC GGACTTCGAC GCACTCAACG AGCGCCAGCG CGAGAAGGGC
GACAAGACCT TCGTCAACCC GCGCAACGCC GCCGCCGGCG CGGTGCGCCA GTTGGACTCA
GGCATCACCG CGCAGCGGCC GCTGTCCTTC TTCGCCTACG GCCTGGGCGA GGTCACGCCG
GCCGCCGAGG GCGGGCCCGA CTTCGGCACG CACTTCGGCA TGCTGCAGCA GCTCAAGGAA
TGGGGCTTTC CGGTTGCAGC CCAGGTGCAG ATTGCGCAAG GCGCTTCTGA ACTCATAGCG
TTCCATCAGC GTGTGGGGGC CGAACGGGAC GCGCTGCCCT ACGACATCGA CGGCGTGGTC
TACAAGGTCA ACAGCCTGGC ACTGCAGCGC CAGCTGGGCT TTGTGACGCG CGAGCCGCGC
TGGGCCGTGG CTCACAAATA CCCGGCCCAG GAGATGGTCA CGCGCGTGGA AGGTATCGAC
GTGCAGGTGG GCCGCACGGG CAAGCTGACC CCTGTGGCGC GACTCGCGCC GGTGTTCGTG
GGCGGCGTCA CGGTGACCAA TGCCACGCTG CACAACCTGT TCGAGCTGCG CCGCAAGAAA
GTGCGCGTGG GCGACCAGGT GATCGTGCGC CGCGCGGGCG ACGTGATTCC CGAGGTGGTG
GGCGTGGTGC CGGCGGGCGC AGGCCTGGCA GTGCTGGCGG GCTCCGACGC GCTGGTGGAC
GCCGCCAGCA GCGCGGACGG CACCGCACCC GCGCAGCCGC TGGCGGGGCC GCGCCAGCCC
TACGTGCCCA ACTTCCGCAT GCCGCGCCAG TGCCCCATCT GCGGCAGCGC CGTGGTGCGC
GAGCCGGGCG AGGTCAACCA CCGCTGCTCC GGCGGGCTGT TCTGCCCCGC GCAGCGCAAA
CAGGCGGTGC TGCACTTCGC CCAGCGCCGC GCCATGGACA TCGAGGGCCT GGGCGAGAAG
CTGGTGGACC AGCTCGTCGA GGGCCACGTG ATCCGCACGC TGCCCGACCT GTACCGGCTC
GGGCTGTCCA GCCTTGCGCA GCTCGACCGC ATGGCCGAGA AGTCCGCGCA GAACGTGCTG
GATGCGCTCG ACAAATCCAA GCGCACCACG CTGGCGCGCT TTCTCTTCGG CCTGGGCATC
CGCCATGTGG GCGAGGCCAC GGCCAAGGAC CTGGCACGCC ACTTCGGCCG GCTCGACGCC
ATCATGGATG CGGGCGTGGA ACAGTTGCTG CAGGTGAACG ACGTGGGGCC CGTGGTGGCC
GAGGCCATCC ACACCTTCTT CGCGCAACCG CACAACCGCG AGGTGGTGGA GCAGCTGCGC
GCCTGCGGCG TCACCTGGGA CGAGAGCGAG CCCGCTGCCG CCGCCACGCT GCCCCTGGCG
GGCATGACCG TGGTGCTGAC CGGCACGCTG CCCACCTTGG GCCGCGACGC AGCCAAGGAC
CTGCTGGAAT CCGCCGGTGC CAAGGTGGCG GGCTCGGTCA GCAAGAAGAC GCACTACGTG
GTGGCCGGCG CCGACGCGGG CAGCAAGCTC GCCAAGGCGC AGGAACTGGG CATCCCCGTG
CTGGACGAGG ACGGGTTGCG TGCGTTGCTG CGGGGCGCGC CGCCCAACGC AGGTGGGGGC
TAG
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| Protein sequence | MGPGLTLSGM TEQSSLFPAP APKGSALVAA KIKALREQLN RWAHEYYVQD TPSVPDAEYD
RAFQELQALE GAYPDLVTPD SPTQRVLGAV LDGLTPVRHR VPMLSIRTET DTEASGAQAF
DARVRRELKL PPDAPPVEYV AEPKFDGLAM SLRYEGGRLV QAATRGDGEV GEDVTHNVRT
IRQIPLSLPA GVPRVLEVRG EVYMRRADFD ALNERQREKG DKTFVNPRNA AAGAVRQLDS
GITAQRPLSF FAYGLGEVTP AAEGGPDFGT HFGMLQQLKE WGFPVAAQVQ IAQGASELIA
FHQRVGAERD ALPYDIDGVV YKVNSLALQR QLGFVTREPR WAVAHKYPAQ EMVTRVEGID
VQVGRTGKLT PVARLAPVFV GGVTVTNATL HNLFELRRKK VRVGDQVIVR RAGDVIPEVV
GVVPAGAGLA VLAGSDALVD AASSADGTAP AQPLAGPRQP YVPNFRMPRQ CPICGSAVVR
EPGEVNHRCS GGLFCPAQRK QAVLHFAQRR AMDIEGLGEK LVDQLVEGHV IRTLPDLYRL
GLSSLAQLDR MAEKSAQNVL DALDKSKRTT LARFLFGLGI RHVGEATAKD LARHFGRLDA
IMDAGVEQLL QVNDVGPVVA EAIHTFFAQP HNREVVEQLR ACGVTWDESE PAAAATLPLA
GMTVVLTGTL PTLGRDAAKD LLESAGAKVA GSVSKKTHYV VAGADAGSKL AKAQELGIPV
LDEDGLRALL RGAPPNAGGG
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