| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1645 |
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| Symbol | |
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| ID | 7384719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1736278 |
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| End bp | 1737315 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643654962 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_002553103 |
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| Protein GI | 222110839 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.528936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACCT TCCATAACCC GCTGCAGCAC ACCCACGCTC CCGAGCACGA ATTTTTCCGC
GGCGAGCGTG TACCGTGTTT CGAGAACCCG ACGCGCGCGG CCTATGTGGA AGCCGCTTTG
ACTGCGCGGG GTCATGTACT GCACCCCCCG GATGTGGATT GCGCTGAGAT CCTGGCAAAG
ATCCATGCGC CGAGCTACCT GGCTTTTCTG GCTTCGGCGT GGCAGCAGTG GCTGTCGCTG
GGTGAAGGGC AGGACCGTGT GCAGCCGTTT CCGTCGGTAT GGCCGGTACG CACATTGCGC
TCGGATGTAG AGCCCGACAA TTTCATTGCC AAGCTGGGGC TGTACTCCAT GGACAACGGC
TCGCCGCTTG CAGCGGGCAC CTGGACGGCA GCCAAAGCAG GCGCCGACGC GGCGGCCAGT
GCCGCGGCGC GCCTGGCGGC TGGCGAGCGC GCCGCGTTCT GCAGCACACG CCCGCCGGGG
CACCATGCAG GCCCCGATTT CATGGGCGGG TACTGCTTCT TGAACAACGC GGCCGTGGCG
GCCCAATGGC TGCGCGACCA CGGCGCGGCC CGTGTGGCCG TGTTAGACGT GGATTACCAC
CACGGCAATG GCACGCAGAG CATCTTCTAT GACCGTGCGG ACGTGCTCTT CGTCAGCATC
CATGGCGATC CCCACACCGA ATACCCCTTC TATCTGGGAC ATGCCGATGA AACCGGCGCA
GGCCTCGGTG CGGGCTGCAA CCTGAACCTG CCTCTGCCGG CCGGAACCGA TGCTGCCACT
TGGTTTGCGG CCTTGGAGCA GGCCTGCGCG CGCATCGCCG CTTTTGGAGC GGATGCCCTG
GTGGTCTCGC TCGGACTGGA TACCTATGAG GGCGATCCGA TCTCGCGCTT TCGGCTGGCG
ACGACGGATT TTCTGCGGCT GGGTGCGCGG CTGCGTGGTG TGGGACTGCC CACCGTGCTG
GTGCTGGAAG GCGGCTACGC AGCGGCGGCG CTGGGAACGA ATGCGGTGAA TGTGCTCGAG
GGTTTCGAGC AGGCATGA
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| Protein sequence | MITFHNPLQH THAPEHEFFR GERVPCFENP TRAAYVEAAL TARGHVLHPP DVDCAEILAK
IHAPSYLAFL ASAWQQWLSL GEGQDRVQPF PSVWPVRTLR SDVEPDNFIA KLGLYSMDNG
SPLAAGTWTA AKAGADAAAS AAARLAAGER AAFCSTRPPG HHAGPDFMGG YCFLNNAAVA
AQWLRDHGAA RVAVLDVDYH HGNGTQSIFY DRADVLFVSI HGDPHTEYPF YLGHADETGA
GLGAGCNLNL PLPAGTDAAT WFAALEQACA RIAAFGADAL VVSLGLDTYE GDPISRFRLA
TTDFLRLGAR LRGVGLPTVL VLEGGYAAAA LGTNAVNVLE GFEQA
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