| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1559 |
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| Symbol | |
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| ID | 7382486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1643603 |
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| End bp | 1645837 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643654875 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_002553020 |
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| Protein GI | 222110756 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0530122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCC AGAAACCCAC CATCATCTAT ACCCTGACCG ACGAGGCTCC CCGCCTGGCC
ACGGCCTCCT TCCTGCCCAT CGTGCGCAGC TTCGCGTCGG TGGCCGGTAT CGAAGTGGCC
GAGAGCGACA TCTCCGTGGC GGCGCGCGTC CTGGGTGAGT TCCCCGACTT CCTGACGCCC
GAGCAGCGCG TACCCAATAC GCTGGCTGAA CTGGGCAAGA AGACGCTCGA GCCCGACGTC
AACATCATCA AGCTGCCCAA CATCAGCGCG TCCGTGGCGC AGTTGATCGC CGCCATCAAG
GAACTGCAAG GCAAGGGCTA CAACCTTCCC GACTACCCCG AGAACCCCAC CACCGACGAG
GAAAAGGCCA TCAAGGCCCG CTATGGCAAA TGCCTGGGCT CGTCCGTGAA CCCGGTGCTG
CGCGAGGGCA ACTCCGACCG CCGCGCGCCT GCCGCGGTGA AGAACTACGC CAAGAAGCAC
CCGCACTCCA TGGGCGAGTG GAAGCAGTGG TCGCAGACGC ATGTGTCCCA CATGCACGAG
GGCGACTTCT ATCATGGCGA AAAGTCCCTG ACCCTGGACA AGGCCCGCGA CGTAAAGATG
GTGCTGGAGA CGAAGTCCGG CAAGACCGTC GTGCTGAAGG AAAAGGTCGC GCTCAAGGAC
GGCGAGATCA TCGACTCCAT GTTCATGAGC AAGAAGGCCC TGTGCGCCTT CTACGAGAAG
GAACTGGCCG ACTGCAAGGA AGCCGGCATC CTGTTCTCGC TGCACGTGAA GGCCACGATG
ATGAAGGTCT CGCACCCGAT CGTGTTCGGT CACTGCGTGA AGATCTACTA CAAGGAAGCC
TTCGAGAAGC ACGGCGCGCT GTTTGACGAG CTGGGCATCA ACGTCAACAA CGGCATGGCC
ACGTTGTACG AGAAGATCGA GACGCTGCCA GCTTCCAAGC GCGAAGAGAT CATCCGCGAC
CTGCACGCCT GCCAGGAGCA CCGTCCGGCG CTGGCCATGG TGGACTCCGC CAAGGGCATC
ACCAACTTCC ACTCGCCCAA CGACATCATC GTGGACGCCT CCATGCCCGC CATGATCCGC
CAGGGCGGCA AGATGTGGGG CGCCGACGGC AAGCCTTACG ACTGCAAGGC CGTGATGCCC
GAGTCGACCT TCGCCCGTAT CTACCAGGAG ATGATCAACT TCTGCAAGTG GCACGGCAAC
TTCGACCCGC GCACCATGGG CACCGTGCCC AACGTGGGCC TGATGGCGCA GAAGGCCGAG
GAATACGGCT CGCATGACAA GACCTTCGAG ATCGCCGAAG ACGGCGTGGC CAACATCGTG
GACATCGCCA CGGGTGAAGT GCTGCTGTCG CAGAACGTGG AAACCGGCGA CATCTGGCGT
ATGTGCCAGG TCAAGGACGC TCCGATCCGC GACTGGGTGA AGCTGGCCGT GACCCGCGCA
CGCAACTCCG GCATGCCCGC CGTGTTCTGG CTGGACCCCT ATCGCCCGCA CGAGAACGAG
CTGATCAAGA AGGTCGAGAA GTACCTGAAG GACCACGACA CTACCGGCCT GAACATCCAG
ATCATGAGCC AGGTGCGTGC AATGCGCTTC ACGCTGGAGC GCGTGGCGCG TGGCCTGGAC
ACCATCTCGG TGACCGGCAA CATCCTGCGC GACTACCTGA CCGACCTGTT CCCGATCATG
GAACTGGGCA CTTCCGCCAA GATGCTGTCC ATCGTGCCCC TGATGGCCGG CGGCGGCATG
TACGAGACGG GCGCGGGCGG CTCCGCTCCC AAGCACGTGC AGCAGCTGGT CGAAGAGAAC
TACCTGCGCT GGGACTCGCT GGGGGAATTC CTGGCGCTGG CCGTGTCGCT GGAAGACCTG
GGCCTGAAGG AAAACAACGC CCGCGCCAAG CTGCTGGCCA AGACGCTGGA CCAGGCTACC
GGCAAGCTGC TGGACGAGAA CAAGTCGCCC TCGCGCAAGG TGGGCGAGAT CGACAACCGC
GGCAGCCAGT TCTATCTGTC GCTGTACTGG GCCCAGGCCC TGGCCGCGCA GTCCGAGGAC
GCCGCGCTGG CCGCCAAGTT CGCTCCGTTG GCCAAGACCC TGGCCGATAA CGAGGCCAAG
ATCGTCGAGG AACTGCGTGT GGTGCAGGGC AAGCCCGCCG ACATCGGTGG CTACTACCTG
CCCGATCTGT CCAAGCTGGA CGCCGTGATG CGCCCCAGCG CCACGTTCAA CGCGGCCATC
GCAGCGCTCG CCTGA
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| Protein sequence | MSTQKPTIIY TLTDEAPRLA TASFLPIVRS FASVAGIEVA ESDISVAARV LGEFPDFLTP
EQRVPNTLAE LGKKTLEPDV NIIKLPNISA SVAQLIAAIK ELQGKGYNLP DYPENPTTDE
EKAIKARYGK CLGSSVNPVL REGNSDRRAP AAVKNYAKKH PHSMGEWKQW SQTHVSHMHE
GDFYHGEKSL TLDKARDVKM VLETKSGKTV VLKEKVALKD GEIIDSMFMS KKALCAFYEK
ELADCKEAGI LFSLHVKATM MKVSHPIVFG HCVKIYYKEA FEKHGALFDE LGINVNNGMA
TLYEKIETLP ASKREEIIRD LHACQEHRPA LAMVDSAKGI TNFHSPNDII VDASMPAMIR
QGGKMWGADG KPYDCKAVMP ESTFARIYQE MINFCKWHGN FDPRTMGTVP NVGLMAQKAE
EYGSHDKTFE IAEDGVANIV DIATGEVLLS QNVETGDIWR MCQVKDAPIR DWVKLAVTRA
RNSGMPAVFW LDPYRPHENE LIKKVEKYLK DHDTTGLNIQ IMSQVRAMRF TLERVARGLD
TISVTGNILR DYLTDLFPIM ELGTSAKMLS IVPLMAGGGM YETGAGGSAP KHVQQLVEEN
YLRWDSLGEF LALAVSLEDL GLKENNARAK LLAKTLDQAT GKLLDENKSP SRKVGEIDNR
GSQFYLSLYW AQALAAQSED AALAAKFAPL AKTLADNEAK IVEELRVVQG KPADIGGYYL
PDLSKLDAVM RPSATFNAAI AALA
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