Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1559 |
Symbol | |
ID | 7382486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1643603 |
End bp | 1645837 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643654875 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_002553020 |
Protein GI | 222110756 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0530122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCC AGAAACCCAC CATCATCTAT ACCCTGACCG ACGAGGCTCC CCGCCTGGCC ACGGCCTCCT TCCTGCCCAT CGTGCGCAGC TTCGCGTCGG TGGCCGGTAT CGAAGTGGCC GAGAGCGACA TCTCCGTGGC GGCGCGCGTC CTGGGTGAGT TCCCCGACTT CCTGACGCCC GAGCAGCGCG TACCCAATAC GCTGGCTGAA CTGGGCAAGA AGACGCTCGA GCCCGACGTC AACATCATCA AGCTGCCCAA CATCAGCGCG TCCGTGGCGC AGTTGATCGC CGCCATCAAG GAACTGCAAG GCAAGGGCTA CAACCTTCCC GACTACCCCG AGAACCCCAC CACCGACGAG GAAAAGGCCA TCAAGGCCCG CTATGGCAAA TGCCTGGGCT CGTCCGTGAA CCCGGTGCTG CGCGAGGGCA ACTCCGACCG CCGCGCGCCT GCCGCGGTGA AGAACTACGC CAAGAAGCAC CCGCACTCCA TGGGCGAGTG GAAGCAGTGG TCGCAGACGC ATGTGTCCCA CATGCACGAG GGCGACTTCT ATCATGGCGA AAAGTCCCTG ACCCTGGACA AGGCCCGCGA CGTAAAGATG GTGCTGGAGA CGAAGTCCGG CAAGACCGTC GTGCTGAAGG AAAAGGTCGC GCTCAAGGAC GGCGAGATCA TCGACTCCAT GTTCATGAGC AAGAAGGCCC TGTGCGCCTT CTACGAGAAG GAACTGGCCG ACTGCAAGGA AGCCGGCATC CTGTTCTCGC TGCACGTGAA GGCCACGATG ATGAAGGTCT CGCACCCGAT CGTGTTCGGT CACTGCGTGA AGATCTACTA CAAGGAAGCC TTCGAGAAGC ACGGCGCGCT GTTTGACGAG CTGGGCATCA ACGTCAACAA CGGCATGGCC ACGTTGTACG AGAAGATCGA GACGCTGCCA GCTTCCAAGC GCGAAGAGAT CATCCGCGAC CTGCACGCCT GCCAGGAGCA CCGTCCGGCG CTGGCCATGG TGGACTCCGC CAAGGGCATC ACCAACTTCC ACTCGCCCAA CGACATCATC GTGGACGCCT CCATGCCCGC CATGATCCGC CAGGGCGGCA AGATGTGGGG CGCCGACGGC AAGCCTTACG ACTGCAAGGC CGTGATGCCC GAGTCGACCT TCGCCCGTAT CTACCAGGAG ATGATCAACT TCTGCAAGTG GCACGGCAAC TTCGACCCGC GCACCATGGG CACCGTGCCC AACGTGGGCC TGATGGCGCA GAAGGCCGAG GAATACGGCT CGCATGACAA GACCTTCGAG ATCGCCGAAG ACGGCGTGGC CAACATCGTG GACATCGCCA CGGGTGAAGT GCTGCTGTCG CAGAACGTGG AAACCGGCGA CATCTGGCGT ATGTGCCAGG TCAAGGACGC TCCGATCCGC GACTGGGTGA AGCTGGCCGT GACCCGCGCA CGCAACTCCG GCATGCCCGC CGTGTTCTGG CTGGACCCCT ATCGCCCGCA CGAGAACGAG CTGATCAAGA AGGTCGAGAA GTACCTGAAG GACCACGACA CTACCGGCCT GAACATCCAG ATCATGAGCC AGGTGCGTGC AATGCGCTTC ACGCTGGAGC GCGTGGCGCG TGGCCTGGAC ACCATCTCGG TGACCGGCAA CATCCTGCGC GACTACCTGA CCGACCTGTT CCCGATCATG GAACTGGGCA CTTCCGCCAA GATGCTGTCC ATCGTGCCCC TGATGGCCGG CGGCGGCATG TACGAGACGG GCGCGGGCGG CTCCGCTCCC AAGCACGTGC AGCAGCTGGT CGAAGAGAAC TACCTGCGCT GGGACTCGCT GGGGGAATTC CTGGCGCTGG CCGTGTCGCT GGAAGACCTG GGCCTGAAGG AAAACAACGC CCGCGCCAAG CTGCTGGCCA AGACGCTGGA CCAGGCTACC GGCAAGCTGC TGGACGAGAA CAAGTCGCCC TCGCGCAAGG TGGGCGAGAT CGACAACCGC GGCAGCCAGT TCTATCTGTC GCTGTACTGG GCCCAGGCCC TGGCCGCGCA GTCCGAGGAC GCCGCGCTGG CCGCCAAGTT CGCTCCGTTG GCCAAGACCC TGGCCGATAA CGAGGCCAAG ATCGTCGAGG AACTGCGTGT GGTGCAGGGC AAGCCCGCCG ACATCGGTGG CTACTACCTG CCCGATCTGT CCAAGCTGGA CGCCGTGATG CGCCCCAGCG CCACGTTCAA CGCGGCCATC GCAGCGCTCG CCTGA
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Protein sequence | MSTQKPTIIY TLTDEAPRLA TASFLPIVRS FASVAGIEVA ESDISVAARV LGEFPDFLTP EQRVPNTLAE LGKKTLEPDV NIIKLPNISA SVAQLIAAIK ELQGKGYNLP DYPENPTTDE EKAIKARYGK CLGSSVNPVL REGNSDRRAP AAVKNYAKKH PHSMGEWKQW SQTHVSHMHE GDFYHGEKSL TLDKARDVKM VLETKSGKTV VLKEKVALKD GEIIDSMFMS KKALCAFYEK ELADCKEAGI LFSLHVKATM MKVSHPIVFG HCVKIYYKEA FEKHGALFDE LGINVNNGMA TLYEKIETLP ASKREEIIRD LHACQEHRPA LAMVDSAKGI TNFHSPNDII VDASMPAMIR QGGKMWGADG KPYDCKAVMP ESTFARIYQE MINFCKWHGN FDPRTMGTVP NVGLMAQKAE EYGSHDKTFE IAEDGVANIV DIATGEVLLS QNVETGDIWR MCQVKDAPIR DWVKLAVTRA RNSGMPAVFW LDPYRPHENE LIKKVEKYLK DHDTTGLNIQ IMSQVRAMRF TLERVARGLD TISVTGNILR DYLTDLFPIM ELGTSAKMLS IVPLMAGGGM YETGAGGSAP KHVQQLVEEN YLRWDSLGEF LALAVSLEDL GLKENNARAK LLAKTLDQAT GKLLDENKSP SRKVGEIDNR GSQFYLSLYW AQALAAQSED AALAAKFAPL AKTLADNEAK IVEELRVVQG KPADIGGYYL PDLSKLDAVM RPSATFNAAI AALA
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