Gene Dtpsy_1448 details

Gene Information

• Locus tag: Dtpsy_1448
• Symbol: thrS
• ID: 7385089
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 1515427
• End bp: 1517346
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643654764
• Product: threonyl-tRNA synthetase
• Protein accession: YP_002552910
• Protein GI: 222110646
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCACA TTACGCTTCC CGACGGTTCC CAGCGAGAGT TTGCTGGTCC CGTGACTGTG 
GCGGAGGTGG CTGCCTCCAT CGGTTCGGGC CTGGCCAAAG CGGCGCTCGC CGGCAAGATC 
GGGGACAAGG TGGTGGATAC CAGCTACCAG ATTACGCAAG ACAGCCCGCT GTCCATCGTG 
ACGGCCAAGG ATGCCGACGG CCTGGAGGTG ATCCGCCACT CTACGGCCCA CCTGCTGGCC 
TATGCGGTCA AGGAACTGTT TCCCGATGCG CAGGTGACCA TCGGGCCGGT GATCGAGAAC 
GGCTTCTACT ACGACTTCTC GTACAAGCGT CCGTTTACGC CGGAAGACTT GGCCGCCATT 
GAAAAGCGCA TGGCGGAACT GGCTGCGAAG GATGAACCAG TGGTGCGCCG TGTATTGCCT 
CGGGACGAGG CGGTGGCGTA CTTCAAGGGC CTGGGCGAAC ACTACAAGGC CGAGATCATT 
GCCAGCATCC CGACGAATGA GGACGTGAGC CTGTACCGCG AGGGCGGCTT TGAAGACCTG 
TGCCGTGGCC CCCACGTACC CAGCACCGGC AAGCTCAAGT TCTTCAAACT CATGAAGGTG 
GCGGGCGCCT ATTGGCGCGG CGACCACCGC AACGAGATGC TCCAGCGCGT CTATGGCACG 
GCATGGGCCA CGAAGGAAGA ACTGCAGCAG TACCTGCACA TGCTGGAAGA GGCCGAGAAG 
CGCGACCACC GCAAGCTGGG CCGTGAGCTT GACCTGTTCC ACATCGACGA GCATTCGCCC 
GGCACGGTGT TCTGGCACCC CAAGGGCTGG ACGCTGTGGC AGGAGGTGGA GCAGTACATG 
CGCCGCGTAT ACCGCGACAA CGGCTACCAG GAGGTCAAGG GCCCGCAGAT CCTAGACAAG 
ACGCTGTGGG AGAAAACGGG ACACTGGGAC AAGTACCGCG ACAACATGTT CACCACTGAG 
AGCGAGAAGC GCGACTACGC TCTCAAGCCG ATGAACTGCC CGGGCCATAT CCTGATCTTC 
AAGCAGGGCA TCAAGAGCTA CCGCGACCTG CCGCTACGCT ACGGCGAGTT CGGCCAGTGC 
CACCGCAACG AGCCCACGGG TGGCCTGCAC GGCATCATGC GCGTGCGCGG TTTCACGCAG 
GACGATGGTC ACATCTTCTG CACGGAAGAC CACATCCTGG CCGAATGCAC AGCTTACACA 
GCGTTGCTGC AAAAGGTCTA CAAGAACTTC GGCTTCCACA ACATCATCTA CAAGGTGGCC 
ACGCGCCCCG AGGCACGCAT CGGTTCCGAC GAGAGCTGGG ACAAGGCCGA GCATGCGCTG 
ATGGAAAGCC TGCGCGCGTC GGGTTGCGAA TTCGAGATCG CTCCCGGCGA TGGCGCCTTC 
TATGGCCCGA AGATCGAGTA CACGCTCAAG GACGCGATCG GACGGCAGTG GCAGTGCGGC 
ACCATGCAGG TGGACTTCTC GATGCCCGAG CGGCTGGATG CAGAGTACGT GGGCGAGGAT 
GGCGGGCGCC ATCGGCCGGT GATGCTGCAC CGCGCCATCG TGGGCAGCCT GGAGCGCTTC 
ATCGGCATCC TGATCGAAGA ACACGCCGGG GCCTTGCCCG TATGGCTTGC GCCCGTACAG 
GTGGCGGTGC TCAATATCAC CGACGCGCAG CAGGATTACT GTCGTGAAAT CGCCGCAAAG 
CTGCAAAAAG CGTTGCCGAA TCAAGGCCTT AGGGTGGTGA CTGATCTGCG TAACGAGAAG 
ATTACGTATA AAATACGGGA GCATTCGCTG CAAAAGCTGC CCTACATCCT CGTCGCCGGC 
GACAAGGAAA AGGCTGCAGG GGCTGTGGCA GTGCGTGCCC GGGGTAACAA AGACCTCGGC 
GTGATGTCCC TCGACGCATT CGTCGATCTG ATCGCGCAGG ACATTGCCTC CAAAGTCTGA 

 

Protein sequence

MIHITLPDGS QREFAGPVTV AEVAASIGSG LAKAALAGKI GDKVVDTSYQ ITQDSPLSIV 
TAKDADGLEV IRHSTAHLLA YAVKELFPDA QVTIGPVIEN GFYYDFSYKR PFTPEDLAAI 
EKRMAELAAK DEPVVRRVLP RDEAVAYFKG LGEHYKAEII ASIPTNEDVS LYREGGFEDL 
CRGPHVPSTG KLKFFKLMKV AGAYWRGDHR NEMLQRVYGT AWATKEELQQ YLHMLEEAEK 
RDHRKLGREL DLFHIDEHSP GTVFWHPKGW TLWQEVEQYM RRVYRDNGYQ EVKGPQILDK 
TLWEKTGHWD KYRDNMFTTE SEKRDYALKP MNCPGHILIF KQGIKSYRDL PLRYGEFGQC 
HRNEPTGGLH GIMRVRGFTQ DDGHIFCTED HILAECTAYT ALLQKVYKNF GFHNIIYKVA 
TRPEARIGSD ESWDKAEHAL MESLRASGCE FEIAPGDGAF YGPKIEYTLK DAIGRQWQCG 
TMQVDFSMPE RLDAEYVGED GGRHRPVMLH RAIVGSLERF IGILIEEHAG ALPVWLAPVQ 
VAVLNITDAQ QDYCREIAAK LQKALPNQGL RVVTDLRNEK ITYKIREHSL QKLPYILVAG 
DKEKAAGAVA VRARGNKDLG VMSLDAFVDL IAQDIASKV