| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1301 |
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| Symbol | |
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| ID | 7382390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1359180 |
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| End bp | 1360724 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643654620 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002552766 |
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| Protein GI | 222110502 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAA AACCCCACCA CCTCTCCTCG TGCACGCTAG CCGCGAAGCC GACGTCCAAG
GGCTTGCGCC CGGTCGCGCT GGCCATGTCC TGCGTGCTGC TGACTGCCTG TGCGACTGTG
GGCCCCGACT ACCGCGAACC GCCACCGGTC GATATTGGCA GCGGTTGGAC TCTGCCTTTG
GCAAGTGAAT CGCAGTCTGC GGATCTGGCC CGCTGGTGGT CCGTGCTGGA CGATCCGATT
CTCGATCGCC TGATGAATAC GGCGCTGGCA CAGAACCTGG ATCTGCGTCA GGCCGCTGCA
CGCATCGATG AAGCGCGTGC CCTGCGCGAT CGCGTGGCCG GGGAGCGTCT TCCCACCGTC
GGCGCTGGGG TCAGCGTCAA CCGGCGCCGT CAAAGCGAGA ACGGCCCTTT ACCCGTTGGC
TCCATCCCTG GCCTTGACGC CACCCAGACC ATTTACGACG CGGGCTTCGA CGCGGCATGG
GAGGCCGATC TGTTCGGCGC CAAGCGGCGC GCCCTGGAAG GCGCCAGCGC CCGCCTGCAA
GCCACCGAAG TCGAAGCACA GGGTGTGCGC ATGCGCGTCG CGGCCGAGGT TGCGCGCACC
TGGTTCACTG CCGTTGGCGC TGGATACGAG CTGCATGCAC AACAAGCCAC GCTGGACACG
CTGCAGCAGA CCTTGGAGTT GGTGCGCCTG CGGCATGCAT TGGGCGACGC ATCCGCCGCC
GATGTAGAGG CGGCCTACGC GCAGTGGACC GCCGTCAACG CGCTGCTGCC GGACATCCAG
GCACGCCAGC GCGCCGCGGT GCTTGGCCTG GGTGTGCTGC TAGGCTCCCC GCCCGAGCGT
GAACTGGCAT TGCTCGACGG CCCATTGGCA CCGTGCACGC TGCGTGCCTT GCCGGTGGGC
GAGCGTGCCG ACCTGCTGCG CCGACGCCCT GACGTGCTGG CTGCGGAACG GCGACTGGCA
GCAAGTTCCG CCGACATCGG CGTGGCCACG GCCGAGCTCT TCCCCAAGCT CTCCATCGGT
GTCGGCGGCG GGTTTCAGGC GCTCAGCACG GGCGATTGGT TCGATGCATC CAGCTCACGT
TTTTCCATCC TGCCGCTGAT TTCCTGGCGC CTGTTCGACG GCGGCCGCGT GCGCGCTGAA
ATCCGGGCAC GTGAGGCAGC CGAGCAGCAG GCTGCGCTGG CCTATGAGCA GGCGGTGCTG
GCGGCGCTGG GCGACGCCGA GCGTGCGCTT GGCGACTATC ACGGCGGGCT GGACACATTG
GAGCGCCGCG CCATGGCCTT GGACGCGGCA CGAACCAGCT ACGGCTACGC CAAGGCCCGC
TACGCCGCGG GCGATGTTGC ACTGGTGGAA CTGCTGGCCG CCCAGCGCAG CTTGCACGAC
GCCGAGACCG CGGCCGCCCG CGCGCATACC AGCGCCGCGG TGCAGTTGGT GGCGCTGTAC
AAGGCGCTTG GTGGTGGCTG GGATGCACCT GCAATGACAT CGCAAACCAA GAATCCAGCC
CTGAAGCCGA TCGCAACTGT GCTCGCAGCA CCCTCAGTTC CTTGA
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| Protein sequence | MKTKPHHLSS CTLAAKPTSK GLRPVALAMS CVLLTACATV GPDYREPPPV DIGSGWTLPL
ASESQSADLA RWWSVLDDPI LDRLMNTALA QNLDLRQAAA RIDEARALRD RVAGERLPTV
GAGVSVNRRR QSENGPLPVG SIPGLDATQT IYDAGFDAAW EADLFGAKRR ALEGASARLQ
ATEVEAQGVR MRVAAEVART WFTAVGAGYE LHAQQATLDT LQQTLELVRL RHALGDASAA
DVEAAYAQWT AVNALLPDIQ ARQRAAVLGL GVLLGSPPER ELALLDGPLA PCTLRALPVG
ERADLLRRRP DVLAAERRLA ASSADIGVAT AELFPKLSIG VGGGFQALST GDWFDASSSR
FSILPLISWR LFDGGRVRAE IRAREAAEQQ AALAYEQAVL AALGDAERAL GDYHGGLDTL
ERRAMALDAA RTSYGYAKAR YAAGDVALVE LLAAQRSLHD AETAAARAHT SAAVQLVALY
KALGGGWDAP AMTSQTKNPA LKPIATVLAA PSVP
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