Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1246 |
Symbol | |
ID | 7383150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1308135 |
End bp | 1309619 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643654567 |
Product | NusA antitermination factor |
Protein accession | YP_002552713 |
Protein GI | 222110449 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0519661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCGCG AGTTGTTGAT GTTGGTAGAA GCCATTTCGC GCGAAAAGAA CGTGGAGCGC GATGTGGTCC TGGGCGCTGT GGAGTCTGCT CTGGCACAGG CCACGAAGAA GCTCTACCAG GGTGAAGTGG ACATCCGCGT GTCGATTGAT CGCGACAGCG GCGAATACGA GACTTTCCGT CGTTGGCTGG TGGTGCCCGA CGATGCCGGA TTGCAGAACC CCGACGCCGA AGAGCTGCTG ATGGATGCCC GCGAACGGGT GGCCGATATC GAGGTGGGGG AGTACATCGA GGAAGCCGTC GAGTCGGTAC CGATCGGCCG CATCGGGGCC ATGGCGGCCA AGCAGGTGAT CCTGCAAAAG ATCCGCGATG CCGAACGCGA GATGCTGCTC AACGATTTCA TGTCACGCGG CGAGAAAATT TTCACCGGCA CGGTGAAACG CATGGACAAG GGCGACATCA TCGTCGAGAG CGGCCGGGTG GAAGGGCGCC TGCGTCGCGG CGAGATGATC CCGAAGGAAA ACCTGCGCAA TGGGGACCGT GTGCGCGCCA TGATCATGGA GGTGGACCTC ACGCTGCGCG GAGCGCCCAT CATCCTCTCG CGCTCCGCGC CGGAGTTCAT GATCGAGTTG TTCCGCAACG AGGTGCCCGA GATCGAACAG GGTCTGCTGG AGATCAAAAG CTGTGCCCGT GACCCCGGCA GCCGCGCGAA GATCGCTGTG CTCAGCCATG ACAAGCGCGT GGACCCCATC GGCACCTGCG TGGGCGTGCG CGGAACGCGT GTGAACGCCG TGACCAACGA ACTGGCAGGA GAGCGTGTGG ACATCGTGCT GTGGTCCGAC GACCCTGCGC AGTTCGTGAT CGGCGCGCTT GCTCCGGCCA ACGTGACTTC CATCGTGGTC GACGAAGAGA AGCACGCCAT GGACGTCGTG GTGGACGAGG AAAACCTCGC CATCGCCATC GGGCGCGGCG GCCAGAACGT GCGCCTGGCG TCCGACCTCA CGGGCTGGAA GATCAACATC ATGGATGCGG CCGAATCCGC GCAGAAGCAG GCCAATGAAA CCGATGCCGC GCGTCGCCTG TTCATGGAGA AGCTGGATGT GGATGAGGAG ATCGCCAACA TCCTGATCGA GGAGGGCTTT GCCAGCCTCG AGGAAGTGGC CTATGTGCCG CTGCAGGAAA TGCTGGAGAT CGAGAGCTTC GACGAGGACA CGGTGAACGA ACTGCGCGCA CGCGCCAAGG ATGCGCTGCT CACCATGGAA ATCGTTCGTG AAGAAAGCGT GGAAAGCGTA TCGCAAGACC TGCGTGACCT CGAAGGTCTG ACGCCCGAAC TGATCGCCAA GTTGGCGGAA GGCGGCGTGC ATACGCGTGA CGACCTGGCC GATTTGGCCA TTGACGAACT GACCGAGCTG ACCGGCCAGT CTGCCGAAGA TGCGACCGCC TTGATCATGA AGGCGCGCGA GCACTGGTTC ACGGGGCAAG AGTAA
|
Protein sequence | MNRELLMLVE AISREKNVER DVVLGAVESA LAQATKKLYQ GEVDIRVSID RDSGEYETFR RWLVVPDDAG LQNPDAEELL MDARERVADI EVGEYIEEAV ESVPIGRIGA MAAKQVILQK IRDAEREMLL NDFMSRGEKI FTGTVKRMDK GDIIVESGRV EGRLRRGEMI PKENLRNGDR VRAMIMEVDL TLRGAPIILS RSAPEFMIEL FRNEVPEIEQ GLLEIKSCAR DPGSRAKIAV LSHDKRVDPI GTCVGVRGTR VNAVTNELAG ERVDIVLWSD DPAQFVIGAL APANVTSIVV DEEKHAMDVV VDEENLAIAI GRGGQNVRLA SDLTGWKINI MDAAESAQKQ ANETDAARRL FMEKLDVDEE IANILIEEGF ASLEEVAYVP LQEMLEIESF DEDTVNELRA RAKDALLTME IVREESVESV SQDLRDLEGL TPELIAKLAE GGVHTRDDLA DLAIDELTEL TGQSAEDATA LIMKAREHWF TGQE
|
| |