Gene Dtpsy_1233 details

Gene Information

• Locus tag: Dtpsy_1233
• Symbol: lpxD
• ID: 7383135
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 1296035
• End bp: 1297015
• Gene Length: 981 bp
• Protein Length: 326 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643654552
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_002552700
• Protein GI: 222110436
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCTTGC GACTCGGGCA GATCGTCGAT GCACTTGGGG GCAGCCTGGA AGGAGGGGAG 
AGGGATACCG AAATCCTCCG CATCGCCCCG CTGGAATCCT CCGGCCCGGG TGACCTGTCC 
TTCCTGAGCA ATCCGCGCTA CCAGTCACAA CTGGCCGCCT CCCAGGCGGC CTGTGTCATT 
GTGGCACCCG CGATGCGCAA TGCAGCCTTG GAGCGCGGCG CTTGCATCGT TGTGGAGCAG 
CCCTACACGT ACTTTGCACA CGTGACGCAG CTGTGGGTGC GCGCGCATGG CCAAGGTGCG 
CCTGCGGGCA TCCACCCCAG CGCCGTAGTC GATCCGCAAG CCCGGGTGGC CCCGACAGCC 
TCGATCGGTC CCCTGTGCGT GGTCGAGCGC GGCGCAGTGA TTGGAGCGCA CACGGTGCTC 
AAGTCGCGGG TGACGGTCGG CGAGCGTTGC ACGGTTGGCG AGCGCTGCAT CCTGCACCCT 
GGCGTGGTCA TCGGGGCCGA CGGCTTCGGC TTTGCGCAGC AGCGCGGCGA ATGGATCAAG 
ATCGAGCAAC TGGGCGCGGT GCGCATCGGC AACGATGTGG AGATTGGTGC GAACACCTGC 
ATCGACCGCG GAGCGCTCGA CGACACGGTC ATCGAAGACG GCGTCAAGCT CGACAACCTG 
ATCCAGATCG CTCACAACGT GCACATCGGC CGCCACACCG CCATGGCGGG CTGTTCCGCG 
GTGGCGGGCA GCACCCGCAT CGGCGCGCAC TGCACGATTG CAGGGGCCGC GTCCATCGTG 
GGGCACTTGC AGTTGGCGGA CAATGTGCAC ATCTCCACCA ACACGGTGGT GACGCACTCG 
ATCACGCAAC CGGGGCAGTA CACCGGGGTG TTTCCCATGG ACGACAATGC GAAGTGGGAA 
AAGAACGCGG CCACGCTGCG GCAGCTGTAC CGGCTGCGTG AACGCATCAA GGCTCTCGAA 
CAAACACGAA AAGACGGCTA G 

 

Protein sequence

MSLRLGQIVD ALGGSLEGGE RDTEILRIAP LESSGPGDLS FLSNPRYQSQ LAASQAACVI 
VAPAMRNAAL ERGACIVVEQ PYTYFAHVTQ LWVRAHGQGA PAGIHPSAVV DPQARVAPTA 
SIGPLCVVER GAVIGAHTVL KSRVTVGERC TVGERCILHP GVVIGADGFG FAQQRGEWIK 
IEQLGAVRIG NDVEIGANTC IDRGALDDTV IEDGVKLDNL IQIAHNVHIG RHTAMAGCSA 
VAGSTRIGAH CTIAGAASIV GHLQLADNVH ISTNTVVTHS ITQPGQYTGV FPMDDNAKWE 
KNAATLRQLY RLRERIKALE QTRKDG