| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1153 |
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| Symbol | |
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| ID | 7384585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1213726 |
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| End bp | 1216902 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643654474 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002552626 |
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| Protein GI | 222110362 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0328718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCC CCCGCTTCTT CATCAACCGG CCGATCTTCG CCATCGTCCT GTCGGTGCTG
ATGCTGATCG CGGGCGCGAT CAGCTATTTC CAGCTCCCCC TGAGCGAGTA CCCCCAGGTC
ACGCCGCCGA CGGTGCAGGT CACCGCCAGC TATCCCGGCG CCAACCCGCA GGTGATCGCC
GACACCGTGG CATCGCCGCT GGAGCAGGCG GTCAACGGCG TGGAAGGCAT GATGTACATG
CAGTCCCAGA TGTCCACGGA CGGGCGGATG GTGCTGACCA TCTCGTTCGA GCAGCACATC
GACCCCGACG TCGCGCAGAT CCAGGTGCAG AACCGCGTCT CACGCGCGCT GCCCCGGTTG
CCGCCCGAGG TCCAGCGCAT CGGCGTGGTC ACCGACAAGA CCGCGCCCGA TATTCTCATG
GTGGTGCATA TGCTCTCGCC GGGGGACCGC TACGACCCGC TGTACGTGTC CAACTACGCG
ATGCTCAACG TGCGCGACGA ACTGGCGCGC CTGCCGGGCA TCGCCAACGT GATCATCGGC
GGTGAAGGCG AGTACGCAAT GCGCGTCTGG CTCGACCCCG AGAAGGTCGC ATCGCGGGGC
ATGACCGCCA GCGATGTGGT CGCCGCCATC CGCGAGCAGA ACGTGCAGGT CGCAGCCGGC
TCGATCGGCC AGCAGCCGAA TGCGTCGGCC GCCTTCCAGG TCAGCGTCAA TGCGCTGGGG
CGCCTGACCA CCGAAGAGCA GTTCGGCGAC ATCGTGATCA AGGCCGGCGC CAACGGCCAG
GTGACCCGCC TGCGCGACGT CGCACGCCTG GAACTGGGCT CGGACAACTA CACCATGCGC
GGCCAGCTCG ACGGCGAGAA CGCGGTCGGC CTGCAAATCC TGATGACGCC CGGCTCCAAT
GCCCTGGACA CGTCCAGCGC GGTGCGCGCG ACGATGGAGC GGCTGCAGGC CAAGTTCCCC
GAAGGCATCG AGTACAAGAT CGCCTACGAC CCCACAGTCT TCGTGCGCGC CTCGCTCCAG
TCCGTCGCCG TCACGCTGCT GGAGGCCATC CTCCTGGTGG TGATCGTGGT GGTGCTGTTC
CTGCAATCTT GGCGCGCGTC GATCATTCCA CTGATCGCCG TGCCGGTCTC GCTGGTCGGC
ACGTTCGCGG TGATGCACAT GTTCGGCTTC TCGCTGAACA CGCTGTCGCT GTTTGGCCTC
GTGCTCTCCA TCGGCATCGT GGTGGATGAC GCCATCGTGG TGGTGGAGAA CGTGGAGCGC
CACATGGCGC TGGGCGAATC GCCCAAGGAT GCGGCGCGCA AGGCGATGGA TGAAGTGACT
GGCCCGATCC TGGCCATCAC CTCGGTGCTG GCAGCGGTCT TCATCCCCTC GGCGTTCCTG
TCGGGGCTGC AGGGCGAGTT CTATCGCCAG TTCGCGCTGA CCATCGCGTT CTCGACCATC
CTGTCGGCGA TCAACTCGCT TACGCTGTCG CCAGCGCTGG CCGCCATCCT GCTCAAGCCG
CACCACGGCG CGGCCAAGCC CGATCGTCTC ACGCGCATCA TCGACGGCGT GTTCGGCGGC
TTCTTCCGCC GCTTCAACCG CTTCTTCGAT CGCGCCTCGA ATTCCTACGT CGGGGGCGTG
CGCCGCGCGG TGCGCGGCAG CGCCATCGTG CTGCTGCTCT ACGTCGGCTT CCTGGGCCTG
ACCTGGCTGG GCTTCCACAA GGTGCCTGCG GGCTTCGTGC CGGCCCAGGA CAAGTACTAT
CTCGTGGGCA TCGCCCAGCT TCCGACCGGC GCCTCGCTGG ATCGCACCGA GGCGGTCGTC
AAGGAGATGA CCAAGATCGC ACTGGCTGAG CCGGGCGTCG AGAGCGTGGT GGCCTTCCCG
GGCCTGTCGG TCAATGGACC GGTGAACCAG CCGAACACCG CGCTGATGTT CGCCATGCTC
AAGCCCTTCG ATGAGCGCAA GGACCCGTCG CTGTCGGCCT TCGCCATCCA GGGCAAGCTC
ATGGGCAAGT TCAGCCAGAT CCCGGACGGC TTCGTTGGCA TCTTCCCGCC GCCGCCGGTG
CCGGGCCTGG GTTCGATGGG CGGCTTCAAG CTGCAGATCG AGGACCGGGC GGGCCTGGGT
CCCGAGGCGC TTGCGCAGGC ACAGGGCCAG ATCATGGGCA AGGCCATGCA GGCGCCCGAG
CTGGCGAACA TGCTCGCCAG CTTCCAGACC AATGCGCCGC AGTTGCAGGT GGACATCGAC
CGGGTGAAGG CCAAGTCGCA GGGCGTATCG CTGACCGAGG TGTTCGACAC CCTGCAGGTC
AACCTTGGCT CGCTCTACGT CAACGACTTC AACCGCTTCG GTCGCACCTA CCGGGTCATG
GCCCAGGCCG ATGCGCAGTT CCGCATGCAG GCTGAGGACA TAGGCATGCT CAAGGTGCGC
AATGCAGCGG GCGACATGAT CCCGCTGAGC GCGATCGCGA CCATCGAGCG CAGTTCCGGC
CCCGACCGGG TGATGCATTA CAACGGCTTT CCCTCGGCCG ACATCAGCGG CGGGCCAGCG
CCGGGCTACT CGTCCGGCCA GGCCACCGCC GCGATTGAGA AGATCGTGAG CGAATCGCTG
CCGGACGGTA TGACCTACGA ATGGACGGAC CTGACTTTCC AGGAAAAACG GGTTGGCAAC
ACGGCGATCT ACATCTTCGC GCTGGCGGTG CTGCTCGCCT TCCTGTTCCT GGCGGCCCAG
TACAACAGTT GGTCGCTGCC GTTCGCTGTG CTGCTGATTG CACCCATGGC GCTGCTCTCG
GCGATCGCCG GCGTCTGGCT CTCTGGGGGC GACAACAACA TCTTCACGCA GATCGGTTTC
GTGGTGCTGG TCGGCCTGGC TGCCAAGAAC GCGATCCTGA TCGTGGAGTT CGCCCGCGCG
AAGGAAAGCG AAGGGGCCGA TCCGCTGGCA GCCGTGCTCG AAGCCGCGCG CTTGCGGCTG
CGCCCGATCT TGATGACGTC GTTCGCCTTC ATCGCTGGCG TGGTGCCGCT GGTGCTGGCC
AGCGGTGCGG GCGCCGAGAT GCGCCACGCC ATGGGCATCG CGGTGTTCGC CGGCATGCTG
GGCGTGACGG TATTCGGCCT GGTGCTGACG CCGGTGTTCT ACGTTGTGGT GCGCAAGCTG
GCGCTGCGCC GCGAAGCGCG CCATGCCCGT GGCGGCATGA CCGACCAGCA CGCATGA
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| Protein sequence | MNFPRFFINR PIFAIVLSVL MLIAGAISYF QLPLSEYPQV TPPTVQVTAS YPGANPQVIA
DTVASPLEQA VNGVEGMMYM QSQMSTDGRM VLTISFEQHI DPDVAQIQVQ NRVSRALPRL
PPEVQRIGVV TDKTAPDILM VVHMLSPGDR YDPLYVSNYA MLNVRDELAR LPGIANVIIG
GEGEYAMRVW LDPEKVASRG MTASDVVAAI REQNVQVAAG SIGQQPNASA AFQVSVNALG
RLTTEEQFGD IVIKAGANGQ VTRLRDVARL ELGSDNYTMR GQLDGENAVG LQILMTPGSN
ALDTSSAVRA TMERLQAKFP EGIEYKIAYD PTVFVRASLQ SVAVTLLEAI LLVVIVVVLF
LQSWRASIIP LIAVPVSLVG TFAVMHMFGF SLNTLSLFGL VLSIGIVVDD AIVVVENVER
HMALGESPKD AARKAMDEVT GPILAITSVL AAVFIPSAFL SGLQGEFYRQ FALTIAFSTI
LSAINSLTLS PALAAILLKP HHGAAKPDRL TRIIDGVFGG FFRRFNRFFD RASNSYVGGV
RRAVRGSAIV LLLYVGFLGL TWLGFHKVPA GFVPAQDKYY LVGIAQLPTG ASLDRTEAVV
KEMTKIALAE PGVESVVAFP GLSVNGPVNQ PNTALMFAML KPFDERKDPS LSAFAIQGKL
MGKFSQIPDG FVGIFPPPPV PGLGSMGGFK LQIEDRAGLG PEALAQAQGQ IMGKAMQAPE
LANMLASFQT NAPQLQVDID RVKAKSQGVS LTEVFDTLQV NLGSLYVNDF NRFGRTYRVM
AQADAQFRMQ AEDIGMLKVR NAAGDMIPLS AIATIERSSG PDRVMHYNGF PSADISGGPA
PGYSSGQATA AIEKIVSESL PDGMTYEWTD LTFQEKRVGN TAIYIFALAV LLAFLFLAAQ
YNSWSLPFAV LLIAPMALLS AIAGVWLSGG DNNIFTQIGF VVLVGLAAKN AILIVEFARA
KESEGADPLA AVLEAARLRL RPILMTSFAF IAGVVPLVLA SGAGAEMRHA MGIAVFAGML
GVTVFGLVLT PVFYVVVRKL ALRREARHAR GGMTDQHA
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