| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1127 |
|---|
| Symbol | tig |
|---|
| ID | 7384556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1183753 |
|---|
| End bp | 1185063 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643654449 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_002552604 |
|---|
| Protein GI | 222110340 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.252568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTAA CTGTTGAAAC CCTTGAAAAG CTTGAGCGCA AGATCACGCT GAGCTTGCCC
CTGACCACGA TCCAGACCGA AGTGGACGCG CGCCTCAAGC GCCTGGCCCG TACGGTGAAG
ATGGATGGTT TCCGTCCCGG CAAGGTCCCC ATGAGCGTAG TGGCTCAGCG TTACGGCTAT
TCGGTGCAAT ACGAAGTGCT GAACGACAAG GTGGGCGAGG CGTTTGCACA GGCCGCCAAT
GAAGCCAACC TGCGCGTGGC AGGCCAGCCG CGCATCACGG AGAAGGACGG CGCGCCTGAG
GGCGAAGTGA CTTTCGACGC CGTGTTCGAG GTGTTCCCCG AGGTCAAGAT CGGCGATCTG
TCCACCGCGG AAGTCGAGAA GCTCTCCGCC GAAGTGACCG ACAGCGCCAT CGACAAGACC
GTGGACATCC TGCGCAAGCA GCGCCGTACC TTCGCGCAGC GTGCCCTGGC CGCTGCTGCA
GAAGACGGCG ATCGCGTGAC GGTGGATTTC GAGGGCAAGA TCGACGGCGA GCCCTTCCAG
GGCGGCAAGG CCGAGGACTT CCAGTTCCTG GTGGGCGAGG GCCAGATGCT CAAGGAATTC
GAAGACGCAG TGCGCGGCAT GAAGTCGGGC GAGAGCAAGA CCTTCCCCCT GGCCTTCCCC
GAGGACTACC ACGGCAAGGA CGTGGCTGGC AAGACGGCCG ACTTCATGGT GACCGTCAAG
AAGATCGAAG CGGCCCACCT GCCCGAGGTG AATGAGCAAC TGGCCAAGTC GCTCGGCATT
GCCGACGGCA CGGTGGAAGG CTTGCGCGCC GACATCAAGA AGAACCTGGA GCGCGAAGTC
AAATTCCGCC TGCTGGCCCG CAACAAGCAA GCCGTGATGG ACGCTCTGGT GTCCAAAGCG
GAACTGGATC TGCCTAACGC CAGCGTGCAA GCTGAAATTG CCCGCCTGTT GGAAGCTGCA
CGCGCCGACC TCAAGCAGCG CGGCATCAAG GACGCCGACA AGGCCGAAAT CCCCGAGGAC
GTGTTCCGCC CTCAGGCCGA GCGCCGCGTG CGCCTGGGCC TGGTGGTCGC CGAACTCGTG
CGTGCCAATA ACCTGCAGGC CAAGCCGGAG CAGCTGAAGG CCCACGTGGA CGAGCTGGCT
GCCAGCTACG AGAAGCCTGA GGACGTGGTG CGCTGGTACT TCAGCGACCG CAATCGCCTG
GCTGAGGTGG AAGCCGTGGT CATCGAGAAC AATGTGACCG ACTTCGTGCT GGGCCAGGCC
AAGGTGAACG ACAAGGCCGT GTCCTTCGAT GAACTGATGG GCCAGGCCTG A
|
|---|
| Protein sequence | MAVTVETLEK LERKITLSLP LTTIQTEVDA RLKRLARTVK MDGFRPGKVP MSVVAQRYGY
SVQYEVLNDK VGEAFAQAAN EANLRVAGQP RITEKDGAPE GEVTFDAVFE VFPEVKIGDL
STAEVEKLSA EVTDSAIDKT VDILRKQRRT FAQRALAAAA EDGDRVTVDF EGKIDGEPFQ
GGKAEDFQFL VGEGQMLKEF EDAVRGMKSG ESKTFPLAFP EDYHGKDVAG KTADFMVTVK
KIEAAHLPEV NEQLAKSLGI ADGTVEGLRA DIKKNLEREV KFRLLARNKQ AVMDALVSKA
ELDLPNASVQ AEIARLLEAA RADLKQRGIK DADKAEIPED VFRPQAERRV RLGLVVAELV
RANNLQAKPE QLKAHVDELA ASYEKPEDVV RWYFSDRNRL AEVEAVVIEN NVTDFVLGQA
KVNDKAVSFD ELMGQA
|
|---|
| |