| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1085 |
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| Symbol | |
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| ID | 7382894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1132770 |
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| End bp | 1134077 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643654400 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002552562 |
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| Protein GI | 222110298 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.126004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGGTC ACTCGCCTTT GCCCGCATCG GAGGCTGCTG CGCCGCGCGG GCCCCGCAAG
CGCAAGTCTG CGGAAGGCGC GCTTCAGGAG AATGTGGCAG TGCCGCAACT GAGCGCTGAC
GGTGCCCAAT CGGACGTGAA GATGCAAGAA GTGCATGAGC AAGGCGCAGC TGTTGAGGTG
CCACGACAGC CCAGCGGCCA TGCCGCCAAG CGCGCGCCGA AGGGCGATGG CTATCAGTTT
GCCGACGTGG TGTCGGGTCA GTTCGACGAG GATGAAGCCA ACGCCGAGCT CGCCCCCGCC
AAGCGGGTGC TGCTTCCCCA GCCAGAAACC CCCAAACTTC ACAAGGTGCT TGCCCAGGCG
GGCATGGGGT CTCGGCTGGA AATGGAGCAG CTCATCCTGG AAGGGCGTAT TTCCGTCAAC
AACGAGCCGG CCCATATCGG ACAGCGCGTG CAGTTTGGGG ACCAGATAAA GGTCAACGGC
AAACCCATCC GCTTCCGTAT TGCACCACCG CCGGTACGCG TGATTGCATA CCACAAGCCG
GTGGGCGAAG TGGTTACGCA TGACGATCCG CAAAACCGCC CCACGGTGTT TCGCAAACTA
CCCCGGCTGC AGCAGGGCAA ATGGCAATCC GTCGGGCGTC TGGACCTGAA TACCGAAGGT
TTGTTGCTAT TTACCAGTTC GGGGGAGCTT GCGAACAAGT TGATGCACCC CCGCTTCGGG
CTGGAGCGTG AATATGCGGC CCGCGTGCTG GGTGCGTTGA GCACCGAGGA AAAGCAGCGC
TTGCTGGAAG GCGTGCCGCT GGAGGATGGC ATGGCTTCCT TTGGCTCCGT GGAAGACGGC
GGCGGCGAGG GCGCCAACTG TTGGTACCGG GTCACCATCT CTGAAGGCCG TAACCGCGAG
GTCCGCCGTA TGTTCGAGGC GGTAGGACAT GCGGTGAGCC GGCTGATTCG GATTCGCTAT
GGGGCCATGA TGCTGCCGCG CGGGCTCAAG CGCGGGGCGT GGCTGGAGCT TGATGAGCGC
GACATTCGTG CCCTGATGCA GGCGGCAGGG GCAACGCTGG ATGGTGGTGG TGCGCGCCCC
ACTAGTGGCC AGGGCAGGGG CGGCCGCAAA GGCGATCGTC GATCCGCGGG GCCCGGCAAG
GCATCTGGCA GTGGGCGTGA CAAGACAGGG GGGCGTGCGG GGCGATCGCC CTCACCGAAT
GCCCAGCCGG ACCCGATGAA GACGTCGCTT GGCTATATCG GGGCCGACAG TTTCTCGCGC
CATCGCCAAC AGCAACGCAA CAACGGGCCG CGCCGCGGCG GCCGTTAG
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| Protein sequence | MAGHSPLPAS EAAAPRGPRK RKSAEGALQE NVAVPQLSAD GAQSDVKMQE VHEQGAAVEV
PRQPSGHAAK RAPKGDGYQF ADVVSGQFDE DEANAELAPA KRVLLPQPET PKLHKVLAQA
GMGSRLEMEQ LILEGRISVN NEPAHIGQRV QFGDQIKVNG KPIRFRIAPP PVRVIAYHKP
VGEVVTHDDP QNRPTVFRKL PRLQQGKWQS VGRLDLNTEG LLLFTSSGEL ANKLMHPRFG
LEREYAARVL GALSTEEKQR LLEGVPLEDG MASFGSVEDG GGEGANCWYR VTISEGRNRE
VRRMFEAVGH AVSRLIRIRY GAMMLPRGLK RGAWLELDER DIRALMQAAG ATLDGGGARP
TSGQGRGGRK GDRRSAGPGK ASGSGRDKTG GRAGRSPSPN AQPDPMKTSL GYIGADSFSR
HRQQQRNNGP RRGGR
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